Job Description P24174 Confidence 99.97% Date Thu Jan 5 11:40:50 GMT 2012 Rank 22 Aligned Residues 229 % Identity 21% Template c1fwyA_ PDB info PDB header:transferase Chain: A: PDB Molecule:udp-n-acetylglucosamine pyrophosphorylase; PDBTitle: crystal structure of n-acetylglucosamine 1-phosphate2 uridyltransferase bound to udp-glcnac Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	K	L	Y	P	V	V	M	A	G	G	S	G	S	R	L	W	P	L	S	R	V	L	Y	P	K	Q	F	L	C	L	K	G	D	L	T	M	L	Q	T	T	I	C	R	L	N	G	V	E	C	E	S	P	V	V	I	C	N	E	Q	H	R	F	I	V	A	E	Q	L	R	Q	L	N	K	L	T	E	N	I
Query Conservation
Alig confidence																					.	.	.	.												.																											.													.	.	.
Template Conservation																					.	.	.	.												.																											.													.	.	.
Template Sequence		N	N	A	M	S	V	V	I	L	A	A	G	K	G	T	R	M	Y	S	.	.	.	.	D	L	P	K	V	L	H	T	L	A	G	.	K	A	M	V	Q	H	V	I	D	A	A	N	E	L	G	A	A	H	V	H	L	V	Y	G	H	G	.	G	D	L	L	K	Q	A	L	K	D	D	N	.	.	.	L	N	W
Template Known Secondary structure													S			G	G	G			.	.	.	.	S	S		G	G	G	S			T	T	.														T	T		S							S	S		.								T	T	T	S		.	.	.
Template Predicted Secondary structure																					.	.	.	.												.																											.													.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.					.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70				.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	E	P	A	G	R	N	T	A	P	A	I	A	L	A	A	L	A	A	K	R	H	S	P	E	S	D	P	L	M	L	V	L	A	A	D	H	V	I	A	D	E	D	A	F	R	A	A	V	R	N	A	M	P	Y	A	E	A	G	K	L	V	T	F	G	I	V	P	D	L	P	E	T	G	Y	G	Y	I	R
Query Conservation
Alig confidence																						.	.	.	.	.																													.	.	.	.																.
Template Conservation																						.	.	.	.	.																													.	.	.	.																.
Template Sequence		V	L	Q	A	E	Q	L	G	T	G	H	A	M	Q	Q	A	A	P	F	F	.	.	.	.	.	A	D	D	E	D	I	L	M	L	Y	G	D	V	P	L	I	S	V	E	T	L	Q	R	L	R	D	A	K	.	.	.	.	P	Q	G	G	I	G	L	L	T	V	K	L	D	D	P	.	T	G	Y	G	R	I	T
Template Known Secondary structure					S	S												G	G	G	S	.	.	.	.	.		T	T	S							T	T		T	T														.	.	.	.		T	T	S									S	S		.	T	T	S
Template Predicted Secondary structure																						.	.	.	.	.																													.	.	.	.																.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.						.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.					.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	E	V	S	A	G	E	Q	D	M	V	A	F	E	V	A	Q	F	V	E	K	P	N	L	E	T	A	Q	A	Y	V	A	S	G	E	Y	Y	W	N	S	G	M	F	L	F	R	A	G	R	Y	L	E	E	L	K	K	Y	R	P	D	I	L	D	A	C	E	K	A	M	S	A	V	D	P	D	L	N	F	I
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.															.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.															.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	E	N	G	.	.	.	.	.	.	.	.	.	.	K	V	T	G	I	V	E	H	K	D	A	T	D	E	.	.	.	.	Q	R	Q	I	Q	E	I	N	T	G	I	L	I	A	N	G	A	D	M	K	R	W	L	A	K	L	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	N	A	Q	G	E
Template Known Secondary structure				T	T	.	.	.	.	.	.	.	.	.	.								G	G	G	S		T	T	.	.	.	.	G	G	G																						T				.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	T	T		S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.															.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		144	.	.	.											.	.	150	.	.	.	.	.	.	.	.	.	160	.					.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.															190	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	D	E	E	A	F	L	A	C	P	E	E	S	V	D	Y	A	V	M	E	R	T	A	D	A	V	V	V	P	M	D	A	G	W	S	D	V	G	S	W	S	S	L	W
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.
Template Sequence		Y	Y	I	T	D	I	I	A	L	.	.	.	.	.	.	.	.	.	A	Y	Q	E	G	R	E	I	V	A	V	H	P	Q	R	L	S	E	V	E	G	V	N	N	R	L	Q
Template Known Secondary structure				T	T						.	.	.	.	.	.	.	.	.				T	T									S	S	G	G	G	G				S	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.										.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions