Job Description P0A9N8 Confidence 99.09% Date Thu Jan 5 11:10:51 GMT 2012 Rank 4 Aligned Residues 123 % Identity 14% Template c3rfaA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:ribosomal rna large subunit methyltransferase n; PDBTitle: x-ray structure of rlmn from escherichia coli in complex with s-2 adenosylmethionine Resolution 2.05 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.								.	.	.	.	.	.	70	.	.	.		.
Predicted Secondary structure																							.																																								.	.	.	.	.	.	.											.
Query SS confidence																							.																																								.	.	.	.	.	.	.											.
Query Sequence		H	Q	Y	Y	P	V	D	I	V	N	G	P	G	T	R	C	T	L	F	V	S	.	G	C	V	H	E	C	P	G	C	Y	N	K	S	T	W	R	V	N	S	G	Q	P	F	T	K	A	M	E	D	Q	I	I	N	D	L	N	D	T	R	.	.	.	.	.	.	.	I	K	R	Q	G	I	S	L	S	G	.	G
Query Conservation																							.																																								.	.	.	.	.	.	.											.
Alig confidence																							.															.	.																								.	.	.	.	.	.	.											.
Template Conservation																																						.	.
Template Sequence		Q	R	V	E	T	V	Y	I	P	E	D	D	R	A	T	L	C	V	S	S	Q	V	G	C	A	L	E	C	K	F	C	S	T	A	Q	Q	.	.	G	F	N	R	N	L	R	V	S	E	I	I	G	Q	V	W	R	A	A	K	I	V	G	A	A	K	V	T	G	Q	R	P	I	T	N	V	V	M	M	G	M	G
Template Known Secondary structure												S	S													S	S			T	T		G	G	G	T	T	.	.																													S	S		S		S						S	S	S
Template Predicted Secondary structure																																						.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																				.								.	.	.
Query SS confidence																				.								.	.	.
Query Sequence		D	P	L	H	P	Q	N	V	P	D	I	L	K	L	V	Q	R	I	.	R	A	E	C	P	G	K	.	.	.	D	I	W	V	W	T	G	Y	K	L	D	E	L	N	A	A	Q	M	Q	V	V	D	L	I	N	V	L	V	D	G	K
Query Conservation																				.								.	.	.
Alig confidence							.	.												.								.	.	.
Template Conservation							.	.
Template Sequence		E	P	L	L	N	.	.	L	N	N	V	V	P	A	M	E	I	M	L	D	D	F	G	F	G	L	S	K	R	R	V	T	L	S	T	S	G	V	V	P	A	L	D	K	L	G	D	M	I	D	V	A	L	A	I	S	L	H	A	P
Template Known Secondary structure			G	G	G		.	.													S	T	T	T	T				G	G	G						S																								S
Template Predicted Secondary structure							.	.
Template SS confidence
		180	.	.	.	.			.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions