Job Description P23482 Confidence 8.05% Date Thu Jan 5 11:39:28 GMT 2012 Rank 45 Aligned Residues 126 % Identity 12% Template c2bg9B_ PDB info PDB header:ion channel/receptor Chain: B: PDB Molecule:acetylcholine receptor protein, beta chain; PDBTitle: refined structure of the nicotinic acetylcholine receptor2 at 4a resolution. Resolution 4.00 Å

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		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.		.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		N	T	M	I	V	A	M	L	L	L	A	A	L	C	V	L	I	A	L	S	A	S	W	L	A	P	K	I	M	H	I	A	H	A	F	T	N	T	P	P	A	T	V	A	S	G	I	A	L	V	P	G	T	F	H	T	Q	V	T	P	S	.	L	L	L	L	L	L	L	A	M	P	L	L	P	G	L	Y	W	L
Query Conservation																																																															.
Alig confidence																																																															.
Template Conservation
Template Sequence		V	Y	T	I	V	P	C	I	L	I	S	I	L	A	I	L	V	F	Y	L	P	P	D	A	G	E	K	M	S	L	S	I	S	A	L	L	A	L	T	V	F	L	L	L	L	A	D	K	V	P	E	T	S	L	S	V	P	I	I	I	S	Y	L	M	F	I	M	I	L	V	A	F	S	V	I	L	S	V	V	V
Template Known Secondary structure																					S	T	T	T		T	T																												T	T	S				S
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		551	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	C	R	S	R	R	A	A	F	R	R	T	G	D	A	W	A	C	G	Y	G	W	E	N	A	M	A	P	S	G	N	G	V	M	Q	P	L	R	V	V	F	S	A	L	F	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	L	H	H	R	S	P	N	T	H	E	A	V	E	A	I	K	Y	I	A	E	Q	L	E	S	A	S	E	F	D	D	L	K	K	D	W	Q	Y	V	A	M	V	A	D	R	L
Template Known Secondary structure							T		T	T	T																													S		S
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions