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Job DescriptionP23482
Confidence7.02%DateThu Jan 5 11:39:28 GMT 2012
Rank65Aligned Residues154
% Identity10%Templatec2bg9A_
PDB info PDB header:ion channel/receptorChain: A: PDB Molecule:acetylcholine receptor protein, alpha chain; PDBTitle: refined structure of the nicotinic acetylcholine receptor2 at 4a resolution.
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   472.......480.........490.........500.........510.........520.... .....530.........540.........550
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Query Sequence  NTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGT. FHTQVTPSLLLLLLLAMPLLPGLYWL
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Template Sequence  VNVIIPCLLFSFLTVLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFTMIFVISSIIVTVVV
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   216...220.........230.........240.........250.........260.........270.........280.........290.....
 
   551........560.........570.........580.........590.........600.........610.........620.........630
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Query Sequence  WCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVI
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Template Sequence  INTHHRSPSTHSAIEGVKYIAEHMKSDEESSNAAEEWKYVAMVI. . . . . . . . . . . . . . . . . . . . . . . . . DHILLCVFMLI
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   296...300.........310.........320.........330......... 340.........350
 
   631........640.........650
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Query Sequence  RPIVSATQRLAKEIQHLQSG
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Template Sequence  CIIGTVSVFAGRLIELSQEG
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   418.420.........430.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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