Return to main results Retrieve Phyre Job Id

Job DescriptionP08722
Confidence32.87%DateThu Jan 5 11:01:37 GMT 2012
Rank116Aligned Residues49
% Identity10%Templated1y14b1
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   520.........530.........540.........550...... ...560.........570.
Predicted Secondary structure 

















....







Query SS confidence 




































. . . .














Query Sequence  VAGRIASLFATLHAIGIESDDGVEILIHVGIDTVKLD. . . . GKFFSAHVNVGDKVN
Query Conservation    
 
     
 

  
    
 










 
 ....
  
   
  
  
 
Alig confidence 









..






.
















....














Template Conservation 
 
 
  
  .. 
 

 
.
 
 
 
  
 
                   

 

Template Sequence  VDGTVVSCSQ. . HGFEVQV. GPMKVFVTKHLMPQDLTFNASYQSSEDVITIKSRIR
Template Known Secondary structure  T..T.TTGGGS
TT




SS

TT
Template Predicted Secondary structure 
..
.















Template SS confidence 























































   87..90...... ...100... ......110.........120.........130.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions