Return to main results Retrieve Phyre Job Id

Job DescriptionP08722
Confidence96.11%DateThu Jan 5 11:01:37 GMT 2012
Rank19Aligned Residues44
% Identity34%Templated1vf7a_
SCOP infoHlyD-like secretion proteins HlyD-like secretion proteins HlyD-like secretion proteins
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   509510.... .....520.........530.........540.........550.........560.........570.........580.......
Predicted Secondary structure 


.































Query SS confidence 





.








































































Query Sequence  ILPSVG. EVRSPVAGRIASLFATLHAIGIESDDGVEILIHVGIDTVKLDGKFFSAHVNVGDKVNTGDRLISFDIPAIREA
Query Conservation 
 
   . 
 

  
 
     
 

  
    
 










 
 
  
   
  
  
  
  
   
   
   
Alig confidence 





.










...................................


























Template Conservation 
 
     
 
 
 
 
 ................................... 
 
  

 
 

  
  

       
Template Sequence  TNAFRIAEVRPQVNGIIL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KRLFKEGSDVKAGQQLYQIDPATYEAD
Template Known Secondary structure 
S


SS
...................................

S
SS
TTS

Template Predicted Secondary structure 




...................................









Template SS confidence 















































































   35....40.........50.. .......60.........70.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions