 |
Job Description | P08722 | Confidence | 39.56% | Date | Thu Jan 5 11:01:37 GMT 2012 |
Rank | 104 | Aligned Residues | 53 |
% Identity | 17% | Template | c2eqsA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:atp-dependent rna helicase dhx8; |
PDBTitle: solution structure of the s1 rna binding domain of human2 atp-dependent rna helicase dhx8
|
Resolution | UNK |
|
  |   |
520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | |
. | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | A | G | R | I | A | S | L | F | A | T | L | H | A | I | G | I | E | S | . |
D | D | G | V | E | I | L | I | H | V | G | I | D | T | V | K | L | D | G | K | F | F | S | A | H | V | N | V | G | D | K | V | N | T |
Query Conservation |   |
  |   |
|   |
|   |   |   |   |   |
|   |
|
|   |   |
|   |   | . |   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |   |
|   |   |   |
|   |
|
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |
Template Sequence |   |
Y | N | G | K | V | T | S | I | M | Q | F | G | C | F | V | Q | L | E | G | L | R | K | R | W | E | G | L | V | H | I | S | E | L | R | R | E | G | R | V | A | N | V | A | D | V | V | S | K | G | Q | R | V | K | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |
| S | S | S | S |
|
|  |  |  |  |
| G | G | G | T | S | S | S | S |
|
|
|
|  |  |  |  |
|
| T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
268 | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|