Job Description P05050 Confidence 88.89% Date Thu Jan 5 10:58:38 GMT 2012 Rank 17 Aligned Residues 166 % Identity 16% Template d2fcta1 SCOP info Double-stranded beta-helix Clavaminate synthase-like PhyH-like Resolution 1.60

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		G	A	V	I	L	R	R	F	A	F	N	A	A	E	Q	L	I	R	D	I	N	D	V	A	S	Q	S	P	F	R	Q	M	V	T	P	G	G	Y	T	M	S	V	A	M	T	N	C	G	H	L	G	W	T	T	H	R	Q	G	Y	L	Y	S	P	I	D	P	Q	T	N	K	P	W	P	A	M	P	Q	S	F	.
Query Conservation																																																																																	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	F	I	G	P	F	D	A	Y	S	P	E	E	M	K	E	T	W	K	R	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	L	L	D	R	S	A	A	A	Y	Q	D	L	D	A	T	N	I	A	N	Y	D	R	H	L	D	D	D	F	L	A	S	H	I	C
Template Known Secondary structure		S							S	S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T			T	T		S								G	G	G	G	B		G	G	G	T								T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40																							.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
			97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.															.	.	.	.	.	.	.	150	.	.						.	.	.	.
Predicted Secondary structure		.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Query SS confidence		.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Query Sequence		.	H	N	L	C	Q	R	A	A	T	A	A	G	Y	P	D	F	Q	P	D	A	C	L	I	N	R	Y	A	P	G	A	K	L	S	L	H	Q	D	K	D	E	P	D	L	R	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	S	V	S	L	G	L	P	A	.	.	.	.	.	I	F	Q	F
Query Conservation		.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Alig confidence		.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template Conservation
Template Sequence		R	P	E	I	C	D	R	V	E	S	I	L	G	P	N	V	L	C	W	R	T	E	F	F	P	K	Y	P	G	D	E	G	T	D	W	H	Q	A	D	T	F	A	N	A	S	G	K	P	Q	I	I	W	P	E	N	E	E	F	G	G	T	I	T	V	W	T	A	F	T	D	A	N	I	A	N	G	C	L	Q	F
Template Known Secondary structure															S														T	T							B			S	S	S		T	T	T	S	S		S					T	T	S				S								S	S		B		T	T	B	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		157	.	.	160	.	.																																																.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	L	K	R	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	L	K	R	L	L	L	E	H	G	D	V	V	V	W	G	G	E	S	R	L	F	Y	H	G	I
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation																																																																											.	.	.
Template Sequence		I	P	G	T	Q	N	S	M	N	Y	D	E	T	K	R	M	T	Y	E	P	D	A	N	N	S	V	V	K	D	G	V	R	R	G	F	F	G	Y	D	Y	R	Q	L	Q	I	D	E	N	W	K	P	D	E	A	S	A	V	P	M	Q	M	K	A	G	Q	F	I	I	F	W	S	T	L	.	.	.	M	H	A	S
Template Known Secondary structure			T	T		T	T	S			B		T	T	S						T	T	T		S	S				T	T					B	T	T	B		G	G	G	G	B	S	S	T	T					G	G	G						B		T	T							T	T	S	.	.	.
Template Predicted Secondary structure																																																																											.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.				.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	L	K	A	G	F	H	P	L	T	I	D	C	R	Y	N	L	T	F	R	Q	A
Query Conservation
Alig confidence							.	.	.	.
Template Conservation							.	.	.	.
Template Sequence		Y	P	H	S	G	.	.	.	.	E	S	Q	E	M	R	M	G	F	A	S	R	Y	V
Template Known Secondary structure				B		S	.	.	.	.	S	S	S	S
Template Predicted Secondary structure							.	.	.	.
Template SS confidence
		238	.	240	.	.					.	.	.	.	.	.	.	250	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions