 |
Job Description | P05050 | Confidence | 3.44% | Date | Thu Jan 5 10:58:38 GMT 2012 |
Rank | 74 | Aligned Residues | 30 |
% Identity | 10% | Template | d1u7ba2 |
SCOP info | DNA clamp
| DNA clamp
| DNA polymerase processivity factor
|
Resolution | 1.88 |
|
  |   |
144 | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | S | V | S | L | G | L | P | A | I | F | Q | F | G | G | L | K | R | N | D | P | L | K | R | L | L | L | E | H | G |
Query Conservation |   |
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |   |   |
|
|   |
|   |
|   |
|   |   |   |
|   |
|   |
|   |
|
|
|
|
Template Sequence |   |
V | T | L | S | M | S | A | D | V | P | L | V | V | E | Y | K | I | A | D | M | G | H | L | K | Y | Y | L | A | P | K |
Template Known Secondary structure |   |
 |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
225 | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|