Job Description P05050 Confidence 3.23% Date Thu Jan 5 10:58:38 GMT 2012 Rank 80 Aligned Residues 48 % Identity 27% Template d1qnaa1 SCOP info TBP-like TATA-box binding protein-like TATA-box binding protein (TBP), C-terminal domain Resolution 1.8

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		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.																							.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	Q	D	K	D	E	P	D	L	R	A	P	I	V	S	V	S	L	G	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	F	Q	F	G	G	L	K	R	N	D	P	L	K	R	L	L	L	E	H	G	D	V	V	V	W	G	G	E	S
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.
Template Conservation																																																						.	.	.	.
Template Sequence		H	P	S	G	I	V	P	T	L	Q	N	I	V	S	T	V	N	L	D	C	K	L	D	L	K	A	I	A	L	Q	A	R	N	A	E	Y	N	P	K	R	F	A	A	V	I	M	R	I	R	E	P	K	.	.	.	.	T	T	A	L	I	F	A	S	G	K	M	V	C	T	G	A	K	S
Template Known Secondary structure			T	T	S																S												S	S					T	T	T		S							T	T	T	T	.	.	.	.							T	T	S								S	S
Template Predicted Secondary structure																																																						.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.					.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions