Return to main results Retrieve Phyre Job Id

Job DescriptionP05050
Confidence16.08%DateThu Jan 5 10:58:38 GMT 2012
Rank29Aligned Residues85
% Identity18%Templated1odma_
SCOP infoDouble-stranded beta-helix Clavaminate synthase-like Penicillin synthase-like
Resolution1.15

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   116...120...... ...130.........140.........150.........160.........170.........
Predicted Secondary structure 



................































Query SS confidence 










. . . . . . . . . . . . . . . .




















































Query Sequence  ACLINRYAPGA. . . . . . . . . . . . . . . . KLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWG
Query Conservation    


 
  
 ................    
 

        






      
           
 
  





 
Alig confidence 










................






.....


















....

















Template Conservation    
 
 

                       


.....   



 
    



  ....   
  
 
    




Template Sequence  SVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHED. . . . . VSLITVLYQSNVQNLQVET. . . . AAGYQDIEADDTGYLINC
Template Known Secondary structure 


SS

GGG

TTS


.....SSS
SS

....TT



TTS
Template Predicted Secondary structure 






















.....







....





Template SS confidence 















































































   183......190.........200.........210...... ...220.........230..... ....240.........250...
 
   180.... .....190.........200.........
Predicted Secondary structure 



.














Query SS confidence 




.
























Query Sequence  GESRL. FYHGIQPLKAGFHPLTIDCRYNLTF
Query Conservation 
 

 .
 


              





Alig confidence 




.
























Template Conservation 

 
   
 
  

  


      
 

  
Template Sequence  GSYMAHLTNNYYKAPIHRVKWVNAERQSLPF
Template Known Secondary structure 
TTTSS






S
Template Predicted Secondary structure 










Template SS confidence 






























   254.....260.........270.........280....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions