Return to main results Retrieve Phyre Job Id

Job DescriptionP05050
Confidence12.66%DateThu Jan 5 10:58:38 GMT 2012
Rank34Aligned Residues127
% Identity20%Templatec3al6A_
PDB info PDB header:unknown functionChain: A: PDB Molecule:jmjc domain-containing protein c2orf60; PDBTitle: crystal structure of human tyw5
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6970.........80.........90.........100.........110.........120.........130.........140........
Predicted Secondary structure 



















































Query SS confidence 















































































Query Sequence  WTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSL
Query Conservation      
  
 
              
     
              

  


 
  
     
 

        





Alig confidence 
































































.....









Template Conservation          

             
    
 
  
   
            
 

  
  
  
 
.....       

 
Template Sequence  FVSEDEKYYLRSLGEDPRKDVADIRKQFPLLKGDIKFPEFFKEEQFFSSVFRISSPGLQLWTHYD. . . . . VMDNLLIQVT
Template Known Secondary structure  SS
TT





SSTTT




TT





S
TTT
TT


.....SS
S
Template Predicted Secondary structure 



































.....


Template SS confidence 















































































   98.100.........110.........120.........130.........140.........150.........160.. .......170..
 
   149150.........160... ......170.........180.........190.........200.
Predicted Secondary structure 








...........................






















Query SS confidence 














. . . . . . . . . . . . . . . . . . . . . . . . . . .





































Query Sequence  GLPAIFQFGGLKRND. . . . . . . . . . . . . . . . . . . . . . . . . . . PLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLTI
Query Conservation 
      
       ...........................    
 
  





 
 

 
 


            
Alig confidence 














...........................















...













.....
Template Conservation 
 


 
  
     
                    
           
 


 



...  
 
 
      
.....
Template Sequence  GKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDVLFIP. . . ALWFHNVISEEFGV. . . . .
Template Known Secondary structure  S


GGG
GGG
TTS


SSS

TTT
GGGGG



TT

...TT

SS
.....
Template Predicted Secondary structure 































...






.....
Template SS confidence 















































































   173......180.........190.........200.........210.........220.........230 .........240....
 
   202.......210
Predicted Secondary structure 

Query SS confidence 








Query Sequence  DCRYNLTFR
Query Conservation    






Alig confidence  ..






Template Conservation  ..


    
Template Sequence  . . GVNIFWK
Template Known Secondary structure  ..
Template Predicted Secondary structure  ..

Template SS confidence 








   245....250.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions