Job Description P05050 Confidence 3.41% Date Thu Jan 5 10:58:38 GMT 2012 Rank 75 Aligned Residues 59 % Identity 22% Template c2yu1A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:jmjc domain-containing histone demethylation protein 1a; PDBTitle: crystal structure of hjhdm1a complexed with a-ketoglutarate Resolution 2.70 Å

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		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.																							.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query Sequence		P	G	A	K	L	S	L	H	Q	D	K	D	E	P	D	L	R	A	P	I	V	S	V	S	L	G	L	P	A	I	F	Q	F	G	G	L	K	R	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	L	K	R	L	L	L	E	H	G	D	V	V	V	W	.	G	G
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Alig confidence												.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation												.	.	.
Template Sequence		R	G	C	Y	T	D	F	H	V	D	.	.	.	F	G	G	T	S	V	W	Y	H	I	H	Q	G	G	K	V	F	W	L	I	P	P	T	A	H	N	L	E	L	Y	E	N	W	L	L	S	G	S	Q	G	D	I	F	L	G	D	R	V	S	D	C	Q	R	I	E	L	K	Q	G	Y	T	F	V	I	P	S	G
Template Known Secondary structure		T	T									.	.	.	G	G	G										S																							T	T			S	S	S						S	S									T	T							T	T
Template Predicted Secondary structure												.	.	.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.				.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		181	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	R	L	F	Y	H	G	I
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	W	I	H	A	V
Template Known Secondary structure		.	.	.	.
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						282	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions