 |
Job Description | P05050 | Confidence | 4.47% | Date | Thu Jan 5 10:58:38 GMT 2012 |
Rank | 58 | Aligned Residues | 22 |
% Identity | 23% | Template | c1kq1W_ |
PDB info |
PDB header:translation | Chain: W: PDB Molecule:host factor for q beta; |
PDBTitle: 1.55 a crystal structure of the pleiotropic translational2 regulator, hfq
|
Resolution | 1.55 Å |
|
  |   |
174 | . | . | . | . | . | |
180 | . | . | . | . | |
. | . | . | . | . | 190 | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |
| . |
|
|
|
|  | . |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
| . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | V | V | V | W | G | . |
G | E | S | R | L | . |
F | Y | H | G | I | Q | P | L | K | A | G |
Query Conservation |   |
|
|
|
|
|   | . |
|   |
|
|   | . |
|   |
|
|
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |
Template Sequence |   |
V | V | S | L | N | S | Q | G | K | Q | H | L | I | Y | K | H | A | I | S | T | Y | T | V | E |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |  |  |  |  |  |  | G | G | G |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|