Return to main results Retrieve Phyre Job Id

Job DescriptionP26281
Confidence31.14%DateThu Jan 5 11:42:51 GMT 2012
Rank7Aligned Residues41
% Identity15%Templatec3r3tA_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:30s ribosomal protein s6; PDBTitle: crystal structure of 30s ribosomal protein s from bacillus anthracis
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   55....60.........70.........80. ........90.....
Predicted Secondary structure 


....











Query SS confidence 


























. . . .













Query Sequence  LNAAVALETSLAPEELLNHTQRIELQQ. . . . GRVRKAERWGPRTL
Query Conservation   
 
    
 
 
  

  

 

   ....

 
   
 




Alig confidence 


























....













Template Conservation 

   

                   
   

 
   
  
 
 
Template Sequence  YEIXYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRL
Template Known Secondary structure 







TTS
TTT









S


Template Predicted Secondary structure 














Template SS confidence 












































   4.....10.........20.........30.........40........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions