Job Description P26281 Confidence 6.99% Date Thu Jan 5 11:42:51 GMT 2012 Rank 40 Aligned Residues 42 % Identity 19% Template c2qbbF_ PDB info PDB header:ribosome Chain: F: PDB Molecule:30s ribosomal protein s6; PDBTitle: crystal structure of the bacterial ribosome from2 escherichia coli in complex with gentamicin. this file3 contains the 30s subunit of the second 70s ribosome, with4 gentamicin bound. the entire crystal structure contains5 two 70s ribosomes and is described in remark 400. Resolution 3.54 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.					.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.
Query SS confidence																															.	.	.	.
Query Sequence		D	Y	L	N	A	A	V	A	L	E	T	S	L	A	P	E	E	L	L	N	H	T	Q	R	I	E	L	Q	Q	.	.	.	.	G	R	V	R	K	A	E	R	W	G	P	R	T	L
Query Conservation																															.	.	.	.
Alig confidence																	.														.	.	.	.
Template Conservation																	.
Template Sequence		R	H	Y	E	I	V	F	M	V	H	P	D	Q	S	E	.	Q	V	P	G	M	I	E	R	Y	T	A	A	I	T	G	A	E	G	K	I	H	R	L	E	D	W	G	R	R	Q	L
Template Known Secondary structure												G	G	G	T	T	.																T	T										B	S
Template Predicted Secondary structure																	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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