Job Description P66899 Confidence 100.00% Date Thu Jan 5 12:10:21 GMT 2012 Rank 23 Aligned Residues 303 % Identity 19% Template d1wkva1 SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.00

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		G	E	T	S	P	L	F	S	Q	S	Q	A	K	L	A	R	Q	F	H	Q	K	I	A	G	Y	R	P	T	P	L	C	A	L	D	D	L	A	N	L	F	G	V	K	K	I	L	V	K	D	E	S	K	R	F	G	.	L	N	A	F	K	M	L	G	G	A	Y	A	I	A	Q	L	L	C	E	K	Y	H	L	D
Query Conservation																																																									.
Alig confidence											.	.	.	.											.	.	.	.													.			.											.		.																					.	.	.	.
Template Conservation											.	.	.	.											.	.	.	.													.			.											.																							.	.	.	.
Template Sequence		V	P	G	E	M	V	F	P	S	.	.	.	.	P	L	D	F	F	E	R	G	K	P	.	.	.	.	T	P	L	V	R	S	R	L	Q	L	P	N	.	G	V	.	R	V	W	L	K	L	E	W	Y	N	.	P	F	S	L	S	V	K	D	R	P	A	V	E	I	I	S	R	L	S	R	R	V	.	.	.	.
Template Known Secondary structure		S		T	T				S	S	.	.	.	.								S		S	.	.	.	.											S	T	.	T		.							G	G	G	S	.	T	T	T	S	B	T	T												T	T	T	S	.	.	.	.
Template Predicted Secondary structure											.	.	.	.											.	.	.	.													.			.											.																							.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.					.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.	.	.	.	.		.	110		.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		I	E	T	L	S	F	E	H	L	K	N	A	I	G	E	K	M	T	F	A	T	T	T	D	G	N	H	G	R	G	V	A	W	A	A	Q	Q	L	G	Q	N	A	V	I	Y	M	P	K	G	S	A	Q	E	R	V	D	A	I	L	N	L	G	A	E	C	I	V	T	D	M	N	.	.	Y	D	D	T	V	R	L
Query Conservation																																																																									.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																																											.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	G	S	L	V	A	D	A	T	S	S	N	F	G	V	A	L	S	A	V	A	R	L	Y	G	Y	R	A	R	V	Y	L	P	G	A	A	E	E	F	G	K	L	L	P	R	L	L	G	A	Q	V	I	V	D	P	E	A	P	S	T	V	H	L	L	P	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.		T	T																						T	T									T	T	S											T	T							T	T		S	S	S	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	M	Q	H	A	Q	Q	H	G	W	E	V	V	Q	D	T	A	W	E	G	Y	T	K	I	P	T	W	I	M	Q	G	Y	A	T	L	A	D	E	A	V	E	Q	M	R	E	M	G	V	T	P	T	H	V	L	L	Q	A	G	V	G	A	M	A	G	G	V	L	G	Y	L	V	D	V	Y	S	P	Q	N	L	H
Query Conservation
Alig confidence																		.	.	.	.	.	.																																																					.	.
Template Conservation																		.	.	.	.	.	.																																																					.	.
Template Sequence		V	M	K	D	S	K	N	E	G	F	V	H	V	N	Q	F	.	.	.	.	.	.	Y	N	D	A	N	F	E	A	H	M	R	G	T	A	R	E	I	F	V	Q	S	R	R	G	G	L	A	L	R	G	V	A	G	S	L	G	T	S	G	H	M	S	A	A	A	F	Y	L	Q	S	V	D	.	.	P	S	I	R
Template Known Secondary structure																T	T	.	.	.	.	.	.	T											T												T	T											S	S	S															.	.	T	T
Template Predicted Secondary structure																		.	.	.	.	.	.																																																					.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.							.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.			.	.	280	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	I	V	E	P	D	K	A	D	C	I	Y	R	S	G	V	K	G	D	I	V	N	V	G	G	D	M	A	T	I	M	A	G	L	A	C	G	E	P	N	P	L	G	W	E	I	L	R	N	C	A	T	Q	F	I	S	C	Q	D	S	V	A	A	L	G	M	R	V	L	G	N	P	Y	G	N	D	P	R	I
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.																																	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.																																	.	.	.	.
Template Sequence		A	V	L	V	Q	P	A	Q	G	D	S	I	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	I	R	R	V	E	T	G	M	.	.	.	.	.	.	.	.	L	W	I	N	M	L	D	I	S	Y	T	L	A	E	V	T	L	E	E	A	M	E	A	V	V	E	V	A	R	S	D	G	.	.	.	.	L
Template Known Secondary structure									T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	T	T				G	G	G			.	.	.	.	.	.	.	.	S					S																										S	.	.	.	.
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.																																	.	.	.	.
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.														.	.	.	.	.	.	300	.	.	.									.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.					.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	G	E	S	G	A	V	G	L	G	V	L	A	A	V	H	Y	H	P	Q	R	Q	S	L	M	E	K	L	A	L	N	K	D	A	V	V	L	V	I	S	T	E	G	D	T	D	V	K	H	Y	R	E	V	V	W
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.
Template Sequence		V	I	G	P	S	G	G	A	A	V	K	A	L	A	K	K	A	.	.	.	.	.	.	.	.	.	A	E	G	D	L	E	P	G	D	Y	V	V	V	V	P	D	T	G	F	K	Y	L	S	L	V	Q	N	A	L	E
Template Known Secondary structure			B																.	.	.	.	.	.	.	.	.		T	T		S		S									B	B	G	G	G
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.										.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions