Job Description P66899 Confidence 100.00% Date Thu Jan 5 12:10:21 GMT 2012 Rank 38 Aligned Residues 299 % Identity 21% Template d1vb3a1 SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.20

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.				.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.
Query SS confidence																																												.	.	.
Query Sequence		R	P	T	P	L	C	A	L	D	D	L	A	N	L	F	G	V	K	K	I	L	V	K	D	E	S	K	R	F	G	L	N	A	F	K	M	L	G	G	A	Y	A	.	.	.	I	A	Q	L	L	C	E	K	Y	H	L	D	I	E	T	L	S	F	E	H	L	K	N	A	I	G	E	K	M	T	F	A	T	T	T
Query Conservation																																												.	.	.
Alig confidence											.	.	.	.	.	.	.	.												.														.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.												.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	P	A	P	V	A	N	V	E	.	.	.	.	.	.	.	.	S	D	V	G	C	L	E	L	F	H	G	.	P	T	L	A	F	K	D	F	G	G	R	F	M	A	Q	M	L	T	H	I	A	G	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	T	I	L	T	A	T
Template Known Secondary structure		S									.	.	.	.	.	.	.	.	T	T									S	.	T	T	S	B	T																T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.												.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90									.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.																				.	.	.	.	130	.	.	.
		120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure													.																.																	.	.
Query SS confidence													.																.																	.	.
Query Sequence		D	G	N	H	G	R	G	V	A	W	A	.	A	Q	Q	L	G	Q	N	A	V	I	Y	M	P	K	G	.	S	A	Q	E	R	V	D	A	I	L	N	L	G	A	E	C	.	.	I	V	T	D	M	N	Y	D	D	T	V	R	L	T	M	Q	H	A	Q	Q	H	G	W	E	V	V	Q	D	T	A	W	E	G	Y
Query Conservation													.																.																	.	.
Alig confidence													.																.																	.	.																																		.
Template Conservation																																																																																	.
Template Sequence		S	G	D	T	G	A	A	V	A	H	A	F	Y	G	L	P	N	V	K	V	V	I	L	Y	P	R	G	K	I	S	P	L	Q	E	K	L	F	C	T	L	G	G	N	I	E	T	V	A	I	D	G	D	F	D	A	C	Q	A	L	V	K	Q	A	F	D	D	E	E	L	K	V	A	L	G	L	N	S	A	N	.
Template Known Secondary structure		S	S	S									T	T	T		T	T									T	T		S										S			T	T								S												G	G	G									T					S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	I	P	T	W	I	M	Q	G	Y	A	T	L	A	D	E	A	V	E	Q	M	R	E	M	G	V	T	P	T	H	V	L	L	Q	A	G	V	G	A	M	A	G	G	V	L	G	Y	L	V	D	V	Y	S	P	Q	N	L	H	S	I	I	V	E	P	D	K	A	D	C	I	Y	R	S	G	V	K	G	D	I
Query Conservation
Alig confidence		.																																																					.	.														.
Template Conservation		.																																																					.	.														.
Template Sequence		.	S	I	N	I	S	R	L	L	A	Q	I	C	Y	Y	F	E	A	V	A	Q	L	P	Q	E	T	R	N	Q	L	V	V	S	V	P	S	G	N	F	G	D	L	T	A	G	L	L	A	K	S	L	G	L	.	.	P	V	K	R	F	I	A	A	T	N	V	N	D	.	T	V	P	R	F	L	H	D	G	Q	W
Template Known Secondary structure		.	T	T	S							T	T								T	T	S		T	T	T	T	T	S								S	S													T	T		.	.			S								S			.									S
Template Predicted Secondary structure		.																																																					.	.														.
Template SS confidence
			213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.			.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.			.	.	.	300	.	.	.	.	.	.	.	.						.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.													.	.	.	.	.
Query SS confidence																							.	.													.	.	.	.	.
Query Sequence		V	N	V	G	G	D	M	A	T	I	M	A	G	L	A	C	G	E	P	N	P	.	.	L	G	W	E	I	L	R	N	C	A	T	Q	.	.	.	.	.	F	I	S	C	Q	D	S	V	A	A	L	G	M	R	V	L	G	N	P	Y	G	N	D	P	R	I	I	S	G	E	S	G	A	V	G	L	G	V	L	A
Query Conservation																							.	.													.	.	.	.	.
Alig confidence						.																	.	.													.	.	.	.	.																			.			.	.	.	.
Template Conservation						.																																																						.			.	.	.	.
Template Sequence		S	P	K	A	.	T	Q	A	T	L	S	N	A	M	D	V	S	Q	P	N	N	W	P	R	V	E	E	L	F	R	R	K	I	W	Q	L	K	E	L	G	Y	A	A	V	D	D	E	T	T	Q	Q	T	M	R	E	L	K	E	.	L	G	.	.	.	.	Y	T	S	E	P	H	A	A	V	A	Y	R	A	L	R
Template Known Secondary structure						.					S	S	G	G	G			S	S		T	T											T	T			G	G	G	S																				.	T	T	.	.	.	.
Template Predicted Secondary structure						.																																																						.			.	.	.	.
Template SS confidence
		289	290	.	.		.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.					.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.		.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		A	V	H	Y	H	P	Q	R	Q	S	L	M	E	K	L	A	L	N	K	D	A	V	V	L	V	I	S	T	.	E	G	D	T	D	V	K	H	Y	R	E	V	V	W	E	G	K	H
Query Conservation																														.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	Q	L	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	Y	G	L	F	L	G	T	A	H	P	A	K	F	K	E	S	V	E	A	I	L	G	E	T	L	D
Template Known Secondary structure		T	T			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T									B		G	G	G	G									T	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		363	.	.	.	.															.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions