Job Description P66899 Confidence 100.00% Date Thu Jan 5 12:10:21 GMT 2012 Rank 14 Aligned Residues 328 % Identity 22% Template d1v8za1 SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.21

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	S	Q	A	K	L	A	R	Q	F	H	Q	K	I	A	G	Y	R	P	T	P	L	C	A	L	D	D	L	A	N	L	F	G	V	K	K	I	L	V	K	D	E	S	K	R	F	G	L	N	A	F	K	M	L	G	G	A	Y	A	I	A	Q	L	L	C	E	K	Y	H	L	D	I	E	T	L	S	F	E	H
Query Conservation
Alig confidence																			.																													.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.																													.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	E	E	F	N	R	Q	L	N	Y	Y	L	K	T	W	A	G	.	R	P	T	P	L	Y	Y	A	K	R	L	T	E	K	I	G	G	A	K	I	Y	L	K	R	E	D	L	V	.	H	G	G	A	H	K	T	N	N	A	I	G	Q	A	L	L	A	K	F	M	G	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																T	T		.		S														T	S	S							G	G	G	S	.	T	T	S	B	T															T	T	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.																													.																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.				.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.				.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.																							.	.	.
Query SS confidence																																										.	.	.																							.	.	.
Query Sequence		L	K	N	A	I	G	E	K	M	T	F	A	T	T	T	D	G	N	H	G	R	G	V	A	W	A	A	Q	Q	L	G	Q	N	A	V	I	Y	M	P	K	.	.	.	G	S	A	Q	E	R	V	D	A	I	L	N	L	G	A	E	C	I	V	T	D	M	.	.	.	N	Y	D	D	T	V	R	L	T	M	Q	H
Query Conservation																																										.	.	.																							.	.	.
Alig confidence		.	.	.	.	.	.																																			.	.	.																							.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	K	T	R	L	I	A	E	T	G	A	G	Q	H	G	V	A	T	A	M	A	G	A	L	L	G	M	K	V	D	I	Y	M	G	A	E	D	V	E	R	Q	K	M	N	V	F	R	M	K	L	L	G	A	N	V	I	P	V	N	S	G	S	R	T	L	K	D	A	I	N	E	A	L	R	D
Template Known Secondary structure		.	.	.	.	.	.									S	S	S													T	T													T	T											T	T								S	T	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		179	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure						.																																							.
Query SS confidence						.																																							.
Query Sequence		A	Q	Q	H	.	G	W	E	V	V	Q	D	T	A	W	E	G	Y	T	K	I	P	T	W	I	M	Q	G	Y	A	T	L	A	D	E	A	V	E	Q	M	R	E	M	.	G	V	T	P	T	H	V	L	L	Q	A	G	V	G	A	M	A	G	G	V	L	G	Y	L	V	D	V	Y	S	P	Q	N	L	H	S	I
Query Conservation						.																																							.
Alig confidence						.																																							.																											.	.	.
Template Conservation																																																																								.	.	.
Template Sequence		W	V	A	T	F	E	Y	T	H	Y	L	I	G	S	V	V	G	P	H	P	Y	P	T	I	V	R	D	F	Q	S	V	I	G	R	E	A	K	A	Q	I	L	E	A	E	G	Q	L	P	D	V	I	V	A	C	V	G	G	G	S	N	A	M	G	I	F	Y	P	F	V	N	.	.	.	D	K	K	V	K	L	V
Template Known Secondary structure						T	T	T							S	S		S	S	T	T																									S	S			S							S	S	S								G	G	G	T	T	.	.	.		T	T	S
Template Predicted Secondary structure																																																																								.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.				.	.	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.					.	270	.	.	.	.	.	.	.	.	.	280	.															.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	E	P	D	K	A	D	C	I	Y	R	.	.	.	.	S	G	V	K	G	D	I	V	N	V	G	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	A	T	I	M	A	G	L	A	C	G	E	P	N	P	L	G	W	E	I	L	R	N	C	A	T	Q	F	I	S	C	Q	D	S	V	A	A
Query Conservation														.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	E	A	G	G	K	G	L	E	S	G	K	H	S	A	S	L	N	A	G	Q	V	G	V	F	H	G	M	L	S	Y	F	L	Q	D	E	E	G	Q	I	K	P	T	H	S	I	A	P	G	L	D	Y	P	G	V	G	P	E	H	A	Y	L	K	K	I	Q	R	A	E	Y	V	T	V	T	D	E	E	A	L
Template Known Secondary structure								T	B	G	G	G	T	B	S													T	T							B		T	T	S		B						S	S	T	T	S			S	B											T	T	S
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.		.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		L	G	M	R	V	L	G	N	P	Y	G	N	D	P	R	I	I	S	G	E	S	G	A	V	G	L	G	V	L	A	A	V	H	Y	H	P	Q	R	Q	S	L	M	E	K	L	A	L	N	K	D	A	V	V	L	V	I	S	T	E	.	G	D	T	D	V	K	H	Y	R	E	V	V	W
Query Conservation																																																													.
Alig confidence													.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation													.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	F	H	E	L	S	R	T	E	G	.	.	.	.	I	I	P	A	L	E	S	A	H	A	V	A	Y	A	M	K	L	A	K	E	.	.	.	.	.	.	.	.	.	.	.	M	S	R	D	E	I	I	I	V	N	L	S	G	R	G	D	K	D	L	D	I	V	L	K	V	S	G
Template Known Secondary structure												S	.	.	.	.			B																	T	.	.	.	.	.	.	.	.	.	.	.	S		T	T									B	B	S	G	G	G
Template Predicted Secondary structure													.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.					340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.												360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions