Job Description P66899 Confidence 99.98% Date Thu Jan 5 12:10:21 GMT 2012 Rank 40 Aligned Residues 334 % Identity 12% Template d1kl7a_ SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.70

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.				.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																														.	.	.	.																																			.	.	.
Query SS confidence																														.	.	.	.																																			.	.	.
Query Sequence		P	L	F	S	Q	S	Q	A	K	L	A	R	Q	F	H	Q	K	I	A	G	Y	R	P	T	P	L	C	A	.	.	.	.	L	D	D	L	A	N	L	F	G	V	K	K	I	L	V	K	D	E	S	K	R	F	G	L	N	A	F	K	M	L	G	G	A	Y	.	.	.	A	I	A	Q	L	L	C	E	K	Y	H
Query Conservation																														.	.	.	.																																			.	.	.
Alig confidence																														.	.	.	.			.	.	.	.	.	.	.	.												.													.	.	.										.	.
Template Conservation																																				.	.	.	.	.	.	.	.												.																									.	.
Template Sequence		E	I	P	D	A	D	L	K	D	L	I	K	R	S	Y	S	T	F	R	S	D	E	V	T	P	L	V	Q	N	V	T	G	D	K	.	.	.	.	.	.	.	.	E	N	L	H	I	L	E	L	F	H	G	.	P	T	Y	A	F	K	D	V	A	L	Q	F	V	G	N	L	F	E	Y	F	L	Q	R	T	.	.
Template Known Secondary structure		T	S													T	T	T		S	S	T	T	S	S						T	T		S	S	.	.	.	.	.	.	.	.	S										S	.	T	T	S	B	T																				.	.
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.												.																									.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.									.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160				.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.																.																.	.	.
Query SS confidence																																						.																.																.	.	.
Query Sequence		L	D	I	E	T	L	S	F	E	H	L	K	N	A	I	G	E	K	M	T	F	A	T	T	T	D	G	N	H	G	R	G	V	A	W	A	.	A	Q	Q	L	G	Q	N	A	V	I	Y	M	P	K	G	.	S	A	Q	E	R	V	D	A	I	L	N	L	G	A	E	.	.	.	C	I	V	T	D	M	N	Y	D
Query Conservation																																						.																.																.	.	.
Alig confidence		.	.	.	.	.	.	.																														.																.																.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	N	A	N	L	P	E	G	E	K	K	Q	I	T	V	V	G	A	T	S	G	D	T	G	S	A	A	I	Y	G	L	R	G	K	K	D	V	S	V	F	I	L	Y	P	T	G	R	I	S	P	I	Q	E	E	Q	X	T	T	V	P	D	E	N	V	Q	T	L	S	V	T	G	T	F	D
Template Known Secondary structure		.	.	.	.	.	.	.		T	T	S		S	S	S											S	S	S										T	T		T	T									T	T	S	S														T	T							S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		D	T	V	R	L	T	M	Q	H	A	Q	Q	H	G	W	E	V	V	Q	D	T	A	W	E	G	Y	T	K	I	P	T	W	I	M	Q	G	Y	A	T	L	A	D	E	A	V	E	Q	M	R	E	M	G	.	V	T	P	T	H	V	L	L	Q	A	G	V	G	A	M	A	G	G	V	L	G	Y	L	V	D	V	Y
Query Conservation																																																						.
Alig confidence																	.	.	.	.																																		.
Template Conservation																	.	.	.	.
Template Sequence		N	C	Q	D	I	V	K	A	I	F	G	D	K	E	F	.	.	.	.	N	H	N	V	G	A	V	N	S	I	N	W	A	R	I	L	A	Q	X	T	Y	Y	F	Y	S	F	F	Q	A	T	N	G	K	D	S	K	K	V	K	F	V	V	P	S	G	N	F	G	D	I	L	A	G	Y	F	A	K	K	X	G	L
Template Known Secondary structure														S	S		.	.	.	.				B					S																						S	S	S	S											S	S	S													T
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230					.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	P	Q	N	L	H	S	I	I	V	E	P	D	K	A	D	C	I	Y	R	S	G	V	K	G	D	I	V	N	V	G	G	D	M	A	T	I	M	A	G	L	A	C	G	E	P	N	P	L	G	W	E	I	L	R	N	C	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.													.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.													.
Template Sequence		.	.	P	I	E	K	L	A	I	A	T	N	E	N	.	D	I	L	D	R	F	L	K	S	G	L	Y	E	R	S	D	K	V	A	A	T	L	S	P	A	X	D	I	L	I	S	S	N	F	E	R	L	L	W	Y	L	A	R	E	Y	L	A	N	G	D	D	L	K	A	G	E	I	V	N	N	W	F	Q	E	L
Template Known Secondary structure		.	.											S		.										S						S	S					S		G	G	G			S	S		T	T													T	S	T	T
Template Predicted Secondary structure		.	.													.
Template SS confidence
				294	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
																						308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	F	I	S	C	Q	D	S	V	A	A	L	G	M	R	V	L	G	N	P	Y	G	N	D	P	R	I	I	S	G	E	S	G	A	V	G	L	G	V	L	A	A	V	H	Y	H	P	Q	R	Q	S	L	M	E	K	L	A	L	N	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		K	T	N	G	K	F	Q	V	D	K	S	I	I	E	G	A	S	K	D	F	T	S	E	R	V	S	N	E	E	T	S	E	T	I	K	K	I	Y	E	S	S	V	N	P	K	H	Y	I	L	D	P	H	T	A	V	G	V	C	A	T	E	R	L	I	A	K	.	.	.	.	.	.	.	.	.	.	D	N	D	K
Template Known Secondary structure					S													T	T	T																								S	S	T	T																					.	.	.	.	.	.	.	.	.	.				T
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.											.	.	.	440
		368	.	370	.	.	.	.	.	.		.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		D	A	V	V	L	V	I	S	T	.	E	G	D	T	D	V	K	H	Y	R	E	V	V	W
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		S	I	Q	Y	I	S	L	S	T	A	H	P	A	K	F	A	D	A	V	N	N	A	L	S
Template Known Secondary structure		T	S								B		G	G	G	G									T
Template Predicted Secondary structure
Template SS confidence
		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions