Job Description P66899 Confidence 100.00% Date Thu Jan 5 12:10:21 GMT 2012 Rank 34 Aligned Residues 309 % Identity 16% Template d1f2da_ SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.00

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.				.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																												.																	.	.	.
Query SS confidence																												.																	.	.	.
Query Sequence		F	H	Q	K	I	A	G	Y	R	P	T	P	L	C	A	L	D	D	L	A	N	L	F	G	V	K	.	K	I	L	V	K	D	E	S	K	R	F	G	L	N	A	F	.	.	.	K	M	L	G	G	A	Y	A	I	A	Q	L	L	C	E	K	Y	H	L	D	I	E	T	L	S	F	E	H	L	K	N	A	I	G
Query Conservation																												.																	.	.	.
Alig confidence																												.											.						.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	A	K	Y	P	L	T	F	G	P	S	P	I	S	N	L	N	R	L	S	Q	H	L	G	S	K	V	N	V	Y	A	K	R	E	D	C	N	.	S	G	L	A	F	G	G	N	K	L	R	K	L	E	Y	I	V	P	D	I	V	E	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y
Template Known Secondary structure		S						S	S	S	S													T	T	T		S							G	G	G	S	.		S	S	T	T									T	T	T							S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.																		.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.												.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.					170	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query Sequence		E	K	M	T	F	A	T	T	T	D	G	N	H	G	R	G	V	A	W	A	A	Q	Q	L	G	Q	N	A	V	I	Y	M	P	K	G	S	A	Q	E	R	V	D	.	.	.	.	.	.	.	.	.	.	.	A	I	L	N	L	G	A	E	C	I	V	T	D	M	N	Y	D	.	.	.	.	D	T	V	R	L	T
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation
Template Sequence		T	H	L	V	S	I	G	G	R	Q	S	N	Q	T	R	M	V	A	A	L	A	A	K	L	G	K	K	C	V	L	I	Q	E	D	W	V	P	I	P	E	A	E	K	D	V	Y	N	R	V	G	N	I	E	L	S	R	I	M	G	A	D	V	R	V	I	E	D	G	F	D	I	G	M	R	K	S	F	A	N	A
Template Known Secondary structure		S								T	T															T											S				G	G	G	T	T	T	T	T	T	S									T	T												S	S
Template Predicted Secondary structure
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	H	A	Q	Q	H	G	W	E	V	V	Q	D	T	A	W	E	G	Y	T	K	I	P	T	W	I	M	Q	G	Y	A	T	L	A	D	E	A	V	E	Q	M	R	E	M	G	V	T	P	T	H	V	L	L	Q	A	G	V	G	A	M	A	G	G	V	L	G	Y	L	V	D	V	Y	S	P	Q	N	L	H	S
Query Conservation
Alig confidence										.	.	.																																																															.	.
Template Conservation										.	.	.																																																															.	.
Template Sequence		L	Q	E	L	E	D	A	G	.	.	.	H	K	P	Y	P	I	P	A	G	C	S	E	H	K	Y	G	G	L	G	F	V	G	F	A	D	E	V	I	N	Q	E	V	E	L	G	I	K	F	D	K	I	V	V	C	C	V	T	G	S	T	T	A	G	I	L	A	G	M	A	Q	Y	G	.	.	R	Q	D	D	V
Template Known Secondary structure								T	T	.	.	.								G	G	G	T	T	S	T	T	T	T	T																	T				S							S	S	S											G	G	G	T	.	.		G	G	G
Template Predicted Secondary structure										.	.	.																																																															.	.
Template SS confidence
		148	.	150	.	.	.	.	.				.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	V	E	P	D	K	A	D	C	I	Y	R	S	G	V	K	G	D	I	V	N	V	G	G	D	M	A	T	I	M	A	G	L	A	C	G	E	P	N	P	L	G	W	E	I	L	R	N	C	A	T	Q	F	I	S	C	Q	D	S	V	A	A	L	G	M	R	V	L	G	N	P	Y	G	N	D	P	R	I	I
Query Conservation
Alig confidence																				.	.	.	.	.	.	.																	.																																	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.																	.																																	.	.	.	.
Template Sequence		I	A	I	D	A	S	F	T	S	E	K	T	K	E	Q	T	L	R	.	.	.	.	.	.	.	I	A	N	N	T	A	K	L	I	G	V	E	H	E	F	K	.	D	F	T	L	D	T	R	F	A	Y	P	C	Y	G	V	P	N	E	G	T	I	E	A	I	R	T	C	A	E	Q	E	G	.	.	.	.	V	L
Template Known Secondary structure							S	S												.	.	.	.	.	.	.										T						S	.							T	T	S	T	T	B	T	T	B																	S	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.																	.																																	.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240								.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.					.	290
		336	.	.	.		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		S	G	E	S	.	G	A	V	G	L	G	V	L	A	A	V	H	Y	H	P	Q	R	Q	S	L	M	E	K	L	A	L	N	K	D	A	V	V	L	V	I	S	T	E	G	D	T	D	V	K	H	Y	R	E
Query Conservation						.
Alig confidence						.													.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.
Template Sequence		T	D	P	V	Y	E	G	K	S	M	Q	G	L	I	A	L	I	.	.	.	.	.	.	.	.	.	K	E	D	Y	F	K	P	G	A	N	V	L	Y	V	H	L	G	G	A	P	A	L	S	A	Y	S	S
Template Known Secondary structure				T	T	T													.	.	.	.	.	.	.	.	.		T	T		S		T	T											G	G	G	G	G	G	G	G	G
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.										.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions