Job Description P66899 Confidence 100.00% Date Thu Jan 5 12:10:21 GMT 2012 Rank 3 Aligned Residues 317 % Identity 20% Template c3l6cA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:serine racemase; PDBTitle: x-ray crystal structure of rat serine racemase in complex with2 malonate a potent inhibitor Resolution 2.20 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	L	F	S	Q	S	Q	A	K	L	A	R	Q	F	H	Q	K	I	A	G	Y	R	P	T	P	L	C	A	L	D	D	L	A	N	L	F	G	V	K	K	I	L	V	K	D	E	S	K	R	F	G	L	N	A	F	K	M	L	G	G	A	Y	A	I	A	Q	L	L	C	E	K	Y	H	L	D	I	E	T	L
Query Conservation
Alig confidence																.	.																								.											.																													.
Template Conservation																.	.																								.											.																													.
Template Sequence		Q	Y	D	I	S	F	A	D	V	E	K	A	H	L	.	.	N	I	Q	D	S	V	H	L	T	P	V	L	T	S	S	I	L	N	Q	I	A	G	R	.	N	L	F	F	K	C	E	L	F	Q	.	K	T	G	S	F	K	I	R	G	A	L	N	A	I	R	G	L	I	P	D	T	L	E	G	K	P	K	A	.
Template Known Secondary structure				S												.	.			T	T	T	S																T	S	.							G	G	G	S	.	G	G	G	B	T	T												S		S	S	S	T	T			S		.
Template Predicted Secondary structure																.	.																								.											.																													.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.			.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	E	H	L	K	N	A	I	G	E	K	M	T	F	A	T	T	T	D	G	N	H	G	R	G	V	A	W	A	A	Q	Q	L	G	Q	N	A	V	I	Y	M	P	K	G	S	A	Q	E	R	V	D	A	I	L	N	L	G	A	E	C	I	V	T	D	M	N	Y	D	D	T	V	R	L	T	M	Q	H	A	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	T	H	S	S	G	N	H	G	Q	A	L	T	Y	A	A	K	L	E	G	I	P	A	Y	I	V	V	P	Q	T	A	P	N	C	K	K	L	A	I	Q	A	Y	G	A	S	I	V	Y	S	E	P	S	D	E	S	R	E	N	V	A	Q	R	I	I	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S													T	T									T	T	S											T	T								S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	G	W	E	V	V	Q	D	T	A	W	E	G	Y	T	K	I	P	T	W	I	M	Q	G	Y	A	T	L	A	D	E	A	V	E	Q	M	R	E	M	G	V	T	P	T	H	V	L	L	Q	A	G	V	G	A	M	A	G	G	V	L	G	Y	L	V	D	V	Y	S	P	Q	N	L	H	S	I	I	V	E	P
Query Conservation
Alig confidence															.	.	.	.	.	.	.																			.	.	.	.																											.	.
Template Conservation															.	.	.	.	.	.	.																			.	.	.	.																											.	.
Template Sequence		E	T	E	G	I	L	V	H	P	N	Q	E	P	.	.	.	.	.	.	.	A	V	I	A	G	Q	G	T	I	A	L	E	V	L	N	Q	V	P	.	.	.	.	L	V	D	A	L	V	V	P	V	G	G	G	G	M	V	A	G	I	A	I	T	I	K	T	L	K	.	.	P	S	V	K	V	Y	A	A	E	P
Template Known Secondary structure				T						S	S	S	S		.	.	.	.	.	.	.							T											T	.	.	.	.	T									S	S	S															.	.	T	T	S
Template Predicted Secondary structure															.	.	.	.	.	.	.																			.	.	.	.																											.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.								.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	A	D	C	I	Y	R	S	G	V	K	G	D	I	V	N	V	G	G	D	M	A	T	I	M	A	G	L	A	C	G	E	P	N	P	L	G	W	E	I	L	R	N	C	A	T	Q	F	I	S	C	Q	D	S	V	A	A	L	G	M	R	V	L	G	N	P	Y	G	N	D	P	R	I	I	S	G	E	S	G
Query Conservation
Alig confidence																																		.																																					.	.	.	.
Template Conservation																																		.																																					.	.	.	.
Template Sequence		S	N	A	D	D	C	Y	Q	S	K	L	K	G	E	L	T	P	N	L	H	P	P	E	T	I	A	D	G	V	K	S	S	.	I	G	L	N	T	W	P	I	I	R	D	L	V	D	D	V	F	T	V	T	E	D	E	I	K	Y	A	T	Q	L	V	W	E	R	M	K	.	.	.	.	L	L	I	E	P	T	A
Template Known Secondary structure		G	G	G										T	S					S	S					S		G	G	G		S		.			T	T	T																																.	.	.	.					G	G	G
Template Predicted Secondary structure																																		.																																					.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.					280	.	.	.	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	G	L	G	V	L	A	A	V	H	Y	H	P	Q	R	Q	S	L	M	E	K	L	A	L	N	K	D	A	V	V	L	V	I	S	T	E	G	D	T	D	V	K
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.
Template Sequence		G	V	G	L	A	A	V	.	.	.	.	.	.	.	.	.	L	S	Q	H	F	Q	T	V	S	P	E	V	K	N	I	C	I	V	L	S	G	G	N	V	D	L	T
Template Known Secondary structure		G							.	.	.	.	.	.	.	.	.	T	S	T	G	G	G	G	S		T	T										B					S	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.
Template SS confidence
		287	.	.	290	.	.	.										.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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