Job Description P66899 Confidence 85.86% Date Thu Jan 5 12:10:21 GMT 2012 Rank 45 Aligned Residues 179 % Identity 11% Template c3dzbA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of prephenate dehydrogenase from streptococcus2 thermophilus Resolution 2.46 Å

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		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	M	T	F	A	T	T	T	D	G	N	H	G	R	G	V	A	W	A	A	Q	Q	L	G	Q	N	A	V	I	Y	M	P	K	G	S	A	Q	E	R	V	D	A	I	L	N	L	G	A	E	C	I	V	T	D	M	N	Y	D	D	T	V	R	L	T	M	Q	H	A	Q	Q	H	G	W	E	V	V	Q	D	T
Query Conservation
Alig confidence										.	.																								.																								.	.	.	.	.	.	.	.
Template Conservation										.	.																								.																								.	.	.	.	.	.	.	.
Template Sequence		K	T	I	Y	I	A	G	L	.	.	G	L	I	G	G	S	L	A	L	G	I	K	R	D	H	P	D	Y	E	I	L	G	Y	.	N	R	S	D	Y	S	R	N	I	A	L	E	R	G	I	V	D	R	A	T	G	D	F	.	.	.	.	.	.	.	.	K	E	F	A	P	L	A	D	V	I	I	L	A	V	P
Template Known Secondary structure							S			.	.	S												T	T		T	T	S						.		S											T		S		S				S			.	.	.	.	.	.	.	.				G	G	G		S						S
Template Predicted Secondary structure										.	.																								.																								.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.			.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.									.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	E	G	Y	T	K	I	P	T	W	I	M	Q	G	Y	A	T	L	A	D	E	A	V	E	Q	M	R	E	M	G	V	T	P	T	H	V	L	L	Q	A	G	V	G	A	M	A	G	G	V	L	G	Y	L	V	D	V	Y	S	P	Q	N	L	H	S	I	I	V	E	P	D	K	A	D	C	I	Y	R	S	G
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Sequence		I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Q	T	X	A	Y	L	K	E	L	A	D	L	D	L	K	D	N	V	I	I	T	D	A	G	S	.	.	T	K	R	E	I	V	E	A	A	E	R	Y	L	T	G	K	N	V	Q	F	V	G	S	H	P	X	A	G	S	A	A	D	V	T	L
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T	S				T	T								S	.	.														T	T	S	S										B						T	T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template SS confidence
		73																	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	G	D	I	V	N	V	G	G	D	M	A	T	I	M	A	G	L	A	C	G	E	P	N	P	L	G	W	E	I	L	R	N	C	A	T	Q	F	I	S	C	Q	D	S	V	A	A	L	G	M	R	V	L
Query Conservation
Alig confidence																					.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.
Template Sequence		F	E	N	A	Y	Y	I	F	T	P	T	S	L	T	K	E	T	T	I	.	.	.	.	.	.	P	E	L	K	D	I	L	S	G	L	K	S	R	Y	V	E	I	D	A	A	E	H	D	R	V	T	S	Q	I
Template Known Secondary structure		T	T	T	S								T	T			T	T			.	.	.	.	.	.							G	G	G	G
Template Predicted Secondary structure																					.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.							160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions