Job Description P66899 Confidence 34.82% Date Thu Jan 5 12:10:21 GMT 2012 Rank 144 Aligned Residues 134 % Identity 17% Template c3d02A_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:putative laci-type transcriptional regulator; PDBTitle: crystal structure of periplasmic sugar-binding protein2 (yp_001338366.1) from klebsiella pneumoniae subsp. pneumoniae mgh3 78578 at 1.30 a resolution Resolution 1.30 Å

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		110	.	.	.	.	.	.	.	.	.	120	.	.						.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.					.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure															.	.	.	.	.																											.	.	.	.
Query SS confidence															.	.	.	.	.																											.	.	.	.
Query Sequence		G	E	K	M	T	F	A	T	T	T	D	G	N	.	.	.	.	.	H	G	R	G	V	A	W	A	A	Q	Q	L	G	Q	N	A	V	I	Y	M	P	K	G	S	A	Q	.	.	.	.	E	R	V	D	A	I	L	N	L	G	A	E	C	I	V	T	D	M	N	Y	D	D	T	V	R	L	T	M	Q	H	A	Q
Query Conservation															.	.	.	.	.																											.	.	.	.
Alig confidence															.	.	.	.	.																											.	.	.	.
Template Conservation
Template Sequence		E	K	T	V	V	N	I	S	K	V	D	G	X	P	W	F	N	R	X	G	E	G	V	V	Q	A	G	K	E	F	N	L	N	A	S	Q	V	G	P	S	S	T	D	A	P	Q	Q	V	K	I	I	E	D	L	I	A	R	K	V	D	A	I	T	I	V	P	N	D	A	N	V	L	E	P	V	F	K	K	A	R
Template Known Secondary structure										S		S	S																		T	T									S	S	S															T	T		S							S
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	G	W	E	V	V	Q	D	T	A	W	E	G	Y	T	K	I	P	T	W	I	M	Q	G	Y	A	T	L	A	D	E	A	V	E	Q	M	R	E	M	G	V	T	P	T	H	V	L	L	Q	A	G	V	G	A	M	A	G	G	V	L	G	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	G	I	V	V	L	T	N	E	S	P	G	Q	P	S	A	N	W	D	V	E	I	I	D	N	E	K	F	A	A	E	Y	V	E	H	X	A	K	R	X	G	G	K	G	G	Y	V	I	Y	V	G	S	L	T	V	P	Q	H	N	L	W	A
Template Known Secondary structure			T	T							S		T	T		T	T		S					S	S																	T	T	T									S		S	S
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions