Job Description P66899 Confidence 100.00% Date Thu Jan 5 12:10:21 GMT 2012 Rank 31 Aligned Residues 277 % Identity 24% Template c2o2jA_ PDB info PDB header:lyase Chain: A: PDB Molecule:tryptophan synthase beta chain; PDBTitle: mycobacterium tuberculosis tryptophan synthase beta chain2 dimer (apoform) Resolution 2.56 Å

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		32	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		A	R	Q	F	H	Q	K	I	A	G	Y	.	.	R	P	T	P	L	C	A	L	D	D	L	A	N	L	F	G	V	K	K	I	L	V	K	D	E	S	K	R	F	G	L	N	A	F	K	M	L	G	G	A	Y	A	I	A	Q	L	L	C	E	K	Y	H	L	D	I	E	T	L	S	F	E	H	L	K	N	A	I
Query Conservation													.	.
Alig confidence													.	.																													.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	D	L	D	R	L	Q	A	N	Y	A	G	R	P	S	P	L	Y	E	A	T	R	L	S	Q	H	A	G	S	A	R	I	F	L	K	R	E	D	L	N	.	H	T	G	S	H	K	I	N	N	V	L	G	Q	A	L	L	A	R	R	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	T	T	S	S		S							T	T	T	G	G	G	T	T	T								G	G	G		.		T	T																	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																											.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																																						.	.	.																								.	.	.	.
Query SS confidence																																						.	.	.																								.	.	.	.
Query Sequence		G	E	K	M	T	F	A	T	T	T	D	G	N	H	G	R	G	V	A	W	A	A	Q	Q	L	G	Q	N	A	V	I	Y	M	P	K	G	.	.	.	S	A	Q	E	R	V	D	A	I	L	N	L	G	A	E	C	I	V	T	D	M	N	Y	.	.	.	.	D	D	T	V	R	L	T	M	Q	H	A	Q	Q	H
Query Conservation																																						.	.	.																								.	.	.	.
Alig confidence		.																																				.	.	.																								.	.	.	.
Template Conservation		.
Template Sequence		.	K	T	R	V	I	A	E	T	G	A	G	Q	H	G	V	A	T	A	T	A	C	A	L	L	G	L	D	C	V	I	Y	M	G	G	I	D	T	A	R	Q	A	L	N	V	A	R	M	R	L	L	G	A	E	V	V	A	V	Q	T	G	S	K	T	L	K	D	A	I	N	E	A	F	R	D	W	V	A	N	A
Template Known Secondary structure		.									S	S	S														T														S	S	T	T								T	T								S	S	S		S																T
Template Predicted Secondary structure		.
Template SS confidence
			117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		G	W	E	V	V	Q	D	T	A	W	E	G	Y	T	K	I	P	T	W	I	M	Q	G	Y	A	T	L	A	D	E	A	V	E	Q	M	R	E	.	M	G	V	T	P	T	H	V	L	L	Q	A	G	V	G	A	M	A	G	G	V	L	G	Y	L	V	D	V	Y	S	P	Q	N	L	H	S	I	I	V	E	P	D
Query Conservation																																							.
Alig confidence																																							.																												.	.	.
Template Conservation																																																																			.	.	.
Template Sequence		D	N	T	Y	Y	C	F	G	T	A	A	G	P	H	P	F	P	T	M	V	R	D	F	Q	R	I	I	G	M	E	A	R	V	Q	I	Q	G	Q	A	G	R	L	P	D	A	V	V	A	C	V	G	G	G	S	N	A	I	G	I	F	H	A	F	L	D	.	.	.	D	P	G	V	R	L	V	G	F	E	A	A
Template Known Secondary structure		T	T								S	S	S											G	G	G															S	S			S							S	S		T	T	S	G	G	G	S	G	G	G	T	T	.	.	.		T	T	S
Template Predicted Secondary structure																																																																			.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260				.	.	.	.	.	.	.	.	.	270	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	D	C	I	Y	R	S	G	V	K	G	D	I	V	N	V	G	G	D	M	A	T	I	M	A	G	L	A	C	G	E	P	N	P	L	G	W	E	I	L	R	N	C	A	T	Q	F	I	S	C	Q	D	S	V	A	A	L	G	M	R	V	L	G	N	P	Y	G	N	D	P	R	I	I	S	G	E	S	G	A
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Sequence		G	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	R	P	I	T	D	S	E	A	M	D	A	F	G	L	L	C	R	M	E	G	.	.	.	.	I	I	P	A	I	E	S	A
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					S		.	.	.	.
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template SS confidence
		334	.	.																																												.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.					.	360	.	.	.	.	.	.
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.		.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		V	G	L	G	V	L	A	A	V	H	Y	H	P	Q	R	Q	S	L	M	E	K	L	A	L	N	K	D	A	V	V	L	V	I	S	T	E	.	G	D	T	D	V	K	H	Y	R	E	V
Query Conservation																																						.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	A	V	A	G	A	L	K	L	G	V	E	.	.	.	.	.	.	.	.	.	.	.	L	G	R	G	A	V	I	V	V	N	L	S	G	R	G	D	K	D	V	E	T	A	A	K	W
Template Known Secondary structure														.	.	.	.	.	.	.	.	.	.	.			T	T									S		S	S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		367	.	.	370	.	.	.	.	.	.	.	.												.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions