Job Description P66899 Confidence 100.00% Date Thu Jan 5 12:10:21 GMT 2012 Rank 16 Aligned Residues 331 % Identity 20% Template c1jbqD_ PDB info PDB header:lyase Chain: D: PDB Molecule:cystathionine beta-synthase; PDBTitle: structure of human cystathionine beta-synthase: a unique pyridoxal 5'-2 phosphate dependent hemeprotein Resolution 2.60 Å

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		4	.	.	.	.	.	10	.	.	.	.	.				.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.																																														.
Query SS confidence														.	.	.																																														.
Query Sequence		F	S	L	K	I	D	I	A	D	N	K	F	.	.	.	F	N	G	E	T	S	P	L	F	S	Q	S	Q	A	K	L	A	R	Q	F	H	Q	K	I	A	G	Y	R	P	T	P	L	C	A	L	D	D	L	A	N	L	F	G	V	K	.	K	I	L	V	K	D	E	S	K	R	F	G	L	N	A	F	K	M	L
Query Conservation														.	.	.																																														.
Alig confidence														.	.	.																																														.											.
Template Conservation																																																																									.
Template Sequence		W	I	R	P	D	A	P	S	R	C	T	W	Q	L	G	R	P	A	S	E	S	P	H	H	H	T	A	P	A	K	S	P	K	I	L	P	D	I	L	K	K	I	G	D	T	P	M	V	R	I	N	K	I	G	K	K	F	G	L	K	C	E	L	L	A	K	C	E	F	F	N	.	A	G	G	S	V	K	D	R
Template Known Secondary structure					T	T									T	T	S		G	G	G			S										S	S		S	S	G	G	G	G	S	S									S					T	T			S							G	G	G	S	.	T	T	S	B	T
Template Predicted Secondary structure																																																																									.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	A	Y	A	I	A	Q	L	L	C	E	K	Y	H	L	D	I	E	T	L	S	F	E	H	L	K	N	A	I	G	E	K	M	T	F	A	T	T	T	D	G	N	H	G	R	G	V	A	W	A	A	Q	Q	L	G	Q	N	A	V	I	Y	M	P	K	G	S	A	Q	E	R	V	D	A	I	L	N	L	G	A
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	S	L	R	M	I	E	D	A	E	R	D	G	T	L	K	P	G	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	I	E	P	T	S	G	N	T	G	I	G	L	A	L	A	A	A	V	R	G	Y	R	C	I	I	V	M	P	E	K	M	S	S	E	K	V	D	V	L	R	A	L	G	A
Template Known Secondary structure														T		S		T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S														T									S													T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.																.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	C	I	V	T	D	M	N	Y	D	D	T	V	R	L	T	M	Q	H	A	Q	Q	H	G	W	E	V	V	Q	D	T	A	W	E	G	Y	T	K	I	P	T	W	I	M	Q	G	Y	A	T	L	A	D	E	A	V	E	Q	M	R	E	M	G	V	T	P	T	H	V	L	L	Q	A	G	V	G	A	M	A	G	G
Query Conservation
Alig confidence										.	.																					.	.	.	.	.																								.	.	.
Template Conservation										.	.																					.	.	.	.	.																								.	.	.
Template Sequence		E	I	V	R	T	P	T	E	.	.	S	H	V	G	V	A	W	R	L	K	N	E	I	P	N	S	H	I	L	D	.	.	.	.	.	Q	Y	R	N	A	S	N	P	L	A	H	Y	D	T	T	A	D	E	I	L	Q	Q	C	.	.	.	D	G	K	L	D	M	L	V	A	S	V	G	T	G	G	T	I	T	G
Template Known Secondary structure										.	.													S	T	T						.	.	.	.	.	T	T	T		T									T										.	.	.	T	T										S	S	S
Template Predicted Secondary structure										.	.																					.	.	.	.	.																								.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.						.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.				.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	G	Y	L	V	D	V	Y	S	P	Q	N	L	H	S	I	I	V	E	P	D	K	A	D	C	I	Y	R	S	G	V	K	G	D	I	V	N	V	G	G	D	M	A	T	I	M	A	G	L	A	C	G	E	P	N	P	L	G	W	E	I	L	R	N	C	A	T	Q	F	I	S	C	Q	D	S	V	A	A	L
Query Conservation
Alig confidence											.	.																											.	.	.	.	.																	.	.	.
Template Conservation											.	.																											.	.	.	.	.																	.	.	.
Template Sequence		I	A	R	K	L	K	E	K	C	.	.	P	G	C	R	I	I	G	V	D	P	E	G	S	I	L	A	E	P	E	E	L	N	Q	T	E	Q	.	.	.	.	.	T	T	Y	E	V	E	G	I	G	Y	D	F	I	P	T	V	.	.	.	L	D	R	T	V	V	D	K	W	F	K	S	N	D	E	E	A	F	T
Template Known Secondary structure											.	.	T	T									T	T		S		S	S	S	G	G	G	G			S		.	.	.	.	.				S			S				S	S			T	T	.	.	.			G	G	G
Template Predicted Secondary structure											.	.																											.	.	.	.	.																	.	.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.						.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.				.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.		.	.	.	380	.	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		G	M	R	V	L	G	N	P	Y	G	N	D	P	R	I	I	S	G	E	S	G	A	V	G	L	G	V	L	A	A	V	H	Y	H	P	Q	R	Q	S	L	M	E	K	L	A	L	N	K	D	A	V	V	L	V	I	S	T	.	E	G	D	T	D	V	K	H	Y
Query Conservation																																																											.
Alig confidence												.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation												.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	A	R	M	L	I	A	Q	E	G	.	.	.	.	L	L	C	G	G	S	A	G	S	T	V	A	V	A	V	K	A	A	Q	E	.	.	.	.	.	.	.	.	.	.	.	L	Q	E	G	Q	R	C	V	V	I	L	P	D	S	V	R	N	Y	M	T	K	F
Template Known Secondary structure										T		.	.	.	.			B															G	G	G	.	.	.	.	.	.	.	.	.	.	.			T	T									B	B	G	G	G	G	T	T	T	T
Template Predicted Secondary structure												.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		334	.	.	.	.	.	340	.	.	.					.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.												.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions