Job Description P66899 Confidence 46.05% Date Thu Jan 5 12:10:21 GMT 2012 Rank 108 Aligned Residues 81 % Identity 16% Template c1gthD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:dihydropyrimidine dehydrogenase; PDBTitle: dihydropyrimidine dehydrogenase (dpd) from pig, ternary2 complex with nadph and 5-iodouracil Resolution 2.25 Å

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		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.																			.	.
Predicted Secondary structure																																																									.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	A	I	A	Q	L	L	C	E	K	Y	H	L	D	I	E	T	L	S	F	E	H	L	K	N	A	I	G	E	K	M	T	F	A	T	T	T	D	G	N	H	G	R	G	V	A	W	A	A	Q	Q	L	G	Q	N	.	A	V	I	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	P
Query Conservation																																																									.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																									.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	A	S	E	V	F	K	A	M	N	I	P	Q	I	R	N	P	C	L	P	S	Q	E	K	M	P	E	A	Y	S	A	K	I	A	L	L	G	A	G	P	A	S	I	S	C	A	S	F	L	A	R	L	G	Y	S	D	I	T	I	F	E	K	Q	E	Y	V	G	G	L	S	T	S	E	I	P	Q	F	R	L	P
Template Known Secondary structure											T				B			T	T	S			G	G	G	S		G	G	G	G									S														T									S	S	S	S		S	T					T	S		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	S	A	Q	E	R	V	D	A	I	L	N	L	G	A	E	C	I	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	D	V	V	N	F	E	I	E	L	M	K	D	L	G	V	K	I	I	C
Template Known Secondary structure														T	T	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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