Return to main results Retrieve Phyre Job Id

Job DescriptionQ5H778
Confidence10.74%DateThu Jan 5 12:37:23 GMT 2012
Rank14Aligned Residues25
% Identity32%Templated1qhda2
SCOP infoViral protein domain Viral protein domain Top domain of virus capsid protein
Resolution1.95

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.
Predicted Secondary structure 




















Query SS confidence 
























Query Sequence  AIMAINSPLNIAAQPGKTRLRKSLK
Query Conservation                     
 
 
 
Alig confidence 
























Template Conservation   
 
 


 


 
     


 

Template Sequence  YSCAINAPANTQQFEHIVQLRRVLT
Template Known Secondary structure  TTTTTTSGGG
Template Predicted Secondary structure 







Template SS confidence 
























   195....200.........210.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions