 |
| Job Description | Q5H778 | | Confidence | 6.47% | Date | Thu Jan 5 12:37:23 GMT 2012 |
| Rank | 37 | Aligned Residues | 25 |
| % Identity | 32% | Template | c1qhdA_ |
| PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:viral capsid vp6; |
PDBTitle: crystal structure of vp6, the major capsid protein of group a2 rotavirus
|
| Resolution | 1.95 Å |
|
| | |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . |
| Predicted Secondary structure | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  | | |  |
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
A | I | M | A | I | N | S | P | L | N | I | A | A | Q | P | G | K | T | R | L | R | K | S | L | K |
| Query Conservation | |
| | | | | | | | | | | | | | | | | | |
| |
| |
| |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
| |
| |
|
|
| |
|
|
| |
| | | | | |
| |
| | |
|
| Template Sequence | |
Y | S | C | A | I | N | A | P | A | N | T | Q | Q | F | E | H | I | V | Q | L | R | R | V | L | T |
| Template Known Secondary structure | |
T | T | T | T | T | T | S | G | G | G | | | | | | | | | | | | | | | |
| Template Predicted Secondary structure | |
|
|
|
|
|
|
|
|
|
|
| | | | | | | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
195 | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
