Return to main results Retrieve Phyre Job Id

Job DescriptionP75711
Confidence10.42%DateThu Jan 5 12:13:19 GMT 2012
Rank14Aligned Residues66
% Identity12%Templatec2zxjB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:transcriptional regulatory protein walr; PDBTitle: crystal structure of yycf dna-binding domain from staphylococcus2 aureus
Resolution1.87 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.........40.........50.........60.........70.... .....80.....
Predicted Secondary structure 









....




Query SS confidence 






















































. . . .










Query Sequence  KIIFLFYLFLIARLKQRYSIREIKRDLWNIRENYSSNAAIAKIYCRKRKASGPGK. . . . HLTILPYGWVR
Query Conservation 































 


 
 


 
  
 
    

....



 



  
Alig confidence 






















































....










Template Conservation    
  

  
       

   
   

          
   
 





         
 

 
 

 
Template Sequence  HREFELFHYLSKHMGQVMTREHLLQTVWGYDYFGDVRTVDVTIRRLREKIEDDPSHPEYIVTRRGVGYFL
Template Known Secondary structure  TTTT

T
TT

S
T
SSTTS
SSTTT
Template Predicted Secondary structure 






















Template SS confidence 





































































   160.........170.........180.........190.........200.........210.........220.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions