Job Description P0A746 Confidence 19.62% Date Wed Jan 25 15:20:17 GMT 2012 Rank 96 Aligned Residues 45 % Identity 29% Template c3trzE_ PDB info PDB header:rna binding protein/rna Chain: E: PDB Molecule:protein lin-28 homolog a; PDBTitle: mouse lin28a in complex with let-7d microrna pre-element Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	S	I	R	Y	I	K	D	L	S	H	G	M	Q	R	I	E	I	R	C	G	N	C	D	A	H	L	G	H	V	F	P	D	G	P	Q	P	T	G	E	R	Y	C	V	N
Query Conservation
Alig confidence																											.
Template Conservation																											.
Template Sequence		L	E	S	I	R	V	T	G	P	G	G	V	F	C	I	G	S	E	D	R	C	Y	N	C	G	.	G	L	D	H	H	A	K	E	C	K	L	P	P	Q	P	K	K	C	H	F
Template Known Secondary structure									S	G	G	G											T	T	T		.		S	S			G	G	G			S								T	T
Template Predicted Secondary structure																											.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions