Job Description P0A746 Confidence 26.19% Date Wed Jan 25 15:20:17 GMT 2012 Rank 31 Aligned Residues 73 % Identity 18% Template c3h0gI_ PDB info PDB header:transcription Chain: I: PDB Molecule:dna-directed rna polymerase ii subunit rpb9; PDBTitle: rna polymerase ii from schizosaccharomyces pombe Resolution 3.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		30	.	.	.	.	.	.	.	.	.	40	.	.						.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure															.	.	.	.	.
Query SS confidence															.	.	.	.	.
Query Sequence		P	F	T	G	R	L	L	H	N	K	R	D	G	.	.	.	.	.	V	Y	H	C	L	I	C	D	A	P	L	F	H	S	Q	T	K	Y	D	S	G	C	G	W	P	S	F	Y	E	P	V	S	E	E	S	I	R	Y	I	K	D	L	S	H	G	M	Q	R	I	E	I	R	C	G	N	C	D	A	H	L	G	H
Query Conservation															.	.	.	.	.
Alig confidence															.	.	.	.	.																																	.	.	.																							.
Template Conservation																																																				.	.	.																							.
Template Sequence		I	E	C	N	N	M	L	Y	P	R	E	D	K	V	D	R	V	L	R	L	A	C	R	N	C	D	Y	S	E	I	A	A	T	S	K	V	Y	R	H	E	L	Q	S	S	N	V	E	N	T	T	.	.	.	V	S	H	D	A	S	T	D	P	T	L	P	R	S	D	K	E	C	P	R	C	H	.	Q	H	E	A
Template Known Secondary structure		S	S	S										T	T	T								S	S	S							S		S									S		S		T	T		T	.	.	.	T		T	T	S	T	T		S	S	S		B			S			S	S	S		.		S
Template Predicted Secondary structure																																																				.	.	.																							.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.
		105	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		84	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions