Job Description P0A746 Confidence 24.26% Date Wed Jan 25 15:20:17 GMT 2012 Rank 45 Aligned Residues 60 % Identity 12% Template c1i3qI_ PDB info PDB header:transcription Chain: I: PDB Molecule:dna-directed rna polymerase ii 14.2kd PDBTitle: rna polymerase ii crystal form i at 3.1 a resolution Resolution 3.10 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	H	C	L	I	C	D	A	P	L	F	H	S	Q	T	K	Y	D	S	G	C	G	W	P	S	F	Y	E	P	V	S	E	E	S	I	R	Y	I	K	D	L	S	H	G	M	Q	R	I	E	I	R	C	G	N	C	D	A	H	L	G	H	V	F
Query Conservation
Alig confidence																	.	.	.																																								.
Template Conservation																	.	.	.																																								.
Template Sequence		L	F	E	C	R	T	C	S	Y	V	E	E	A	G	S	.	.	.	P	L	V	Y	R	H	E	L	I	T	N	I	G	E	T	A	G	V	V	Q	D	I	G	S	D	P	T	L	P	R	S	D	R	E	C	P	K	C	H	.	S	R	E	N	V	F
Template Known Secondary structure						S	S	S							S		.	.	.	S							S	S			T	T	S	S		S			T	T	G	G	G		T	T	S								T	T	T		.		S		B
Template Predicted Secondary structure																	.	.	.																																								.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions