Job Description P0AFP4 Confidence 98.06% Date Thu Jan 5 11:26:54 GMT 2012 Rank 300 Aligned Residues 153 % Identity 14% Template c1nytC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: shikimate dehydrogenase aroe complexed with nadp+ Resolution 1.50 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	Q	K	S	V	L	I	T	G	C	S	S	G	I	G	L	E	S	A	L	E	L	K	R	Q	G	F	H	V	L	A	G	C	R	K	P	D	D	V	E	R	M	N	S	M	G	F	T	G	V	L	I	D	L	D	S	P	E	S	V	D	R	A	A	D	E	V	I	A	L	T	D	N	C	L	Y	G	I	F
Query Conservation
Alig confidence													.																																																		.	.	.	.	.	.	.	.	.	.
Template Conservation													.																																																		.	.	.	.	.	.	.	.	.	.
Template Sequence		R	P	G	L	R	I	L	L	I	G	A	.	G	G	A	S	R	G	V	L	L	P	L	L	S	L	D	C	A	V	T	I	T	N	R	T	V	S	R	A	E	E	L	A	K	L	F	A	H	T	G	S	I	Q	A	L	S	M	D	E	L	.	.	.	.	.	.	.	.	.	.	E	G	H	E	F	D	L	I	I
Template Known Secondary structure			T	T									.	S													T	T								S	S											T	T	T	T	S							T	G	G	G	.	.	.	.	.	.	.	.	.	.	T	T				S
Template Predicted Secondary structure													.																																																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.											.	.	.	180	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	A	G	F	G	M	Y	G	P	L	S	T	I	S	R	A	Q	M	E	Q	Q	F	S	A	N	F	F	G	A	H	Q	L	T	M	R	L	L	P	A	M	L	P	H	G	E	G	R	I	V	M	T	S	S	V	M	G	L	I	S	T	P	G	R	G	A	Y	A	A	S	K	Y	A	L	E	A	W	S	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	A	T	S	S	G	I	S	G	D	I	P	A	I	P	S	S	L	I	H	P	G	I	Y	C	Y	D	M	F	Y	Q	K	G	K	T	P	F	L	A	W	C	E	Q	R	G	S	K	R	N	A	D	G	L	G	M	L	V	A	Q	A	A	H	A	F	L	L	W	H	G	V	L	P	D	V	E	P	V	I	K	Q
Template Known Secondary structure				S	S		G	G	G	T							G	G	G			T	T						S				S	S											T	T							T																	S	S
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		173	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	M	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	E	E
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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