300 c1nytC_ Probab=98.06   E-value=1.8e-05  Score=48.56  Aligned_columns=153  Identities=14%

Q ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf             58988999388998899999999988998999988988998887459748652122211222221100123331101320
Q batch____        13 VMQKSVLITGCSSGIGLESALELKRQGFHVLAGCRKPDDVERMNSMGFTGVLIDLDSPESVDRAADEVIALTDNCLYGIF   92 (269)
Q Consensus        13 l~gK~vlVTGassGIG~~la~~la~~G~~V~~~~R~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (269)
                      +++|.+||.|+ ||.|++++..|++.|++|.++.|+.++.+++++................          .....|+++
T Consensus       117 ~~~k~vlv~Ga-GGaarAv~~~L~~~g~~i~I~nR~~~ka~~La~~~~~~~~~~~~~~~~~----------~~~~~divI  185 (269)
T c1nytC_         117 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDEL----------EGHEFDLII  185 (269)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTTTTSEEEECCTGGG----------TTCCCSEEE
T ss_pred             CCCCEEEEEEC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCEECCCHHH----------CCCCCCEEE
T ss_conf             77866999815-6899999999997698799984898999999997310278137270120----------324695772


Q ss_pred             CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             13433222222222100000111100000001244200332000001111100023320243200356659999999999
Q batch____        93 NNAGFGMYGPLSTISRAQMEQQFSANFFGAHQLTMRLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDA  172 (269)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~  172 (269)
                      +...............+.........-..+......+............+..-..........+..+..-+.-.+...+.
T Consensus       186 naTp~G~~~~~~~~~~~~l~~~~~v~D~vY~P~~T~ll~~A~~~G~~~~~~G~~ml~~Qa~~~f~lwtg~~~~~~~~~~~  265 (269)
T c1nytC_         186 NATSSGISGDIPAIPSSLIHPGIYCYDMFYQKGKTPFLAWCEQRGSKRNADGLGMLVAQAAHAFLLWHGVLPDVEPVIKQ  265 (269)
T ss_dssp             ECSSCGGGTCCCCCCGGGCCTTCEEEESCCCSSCCHHHHHHHHTTCCEEECTHHHHHHHHHHHHHHHHSSCCCCHHHHHH
T ss_pred             ECCCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
T ss_conf             01002567776779857839980999971866489889999986997898558999999999999983898998999999


Q ss_pred             HHHH
Q ss_conf             8731
Q batch____       173 LRME  176 (269)
Q Consensus       173 l~~e  176 (269)
                      +..|
T Consensus       266 l~~e  269 (269)
T c1nytC_         266 LQEE  269 (269)
T ss_dssp             HHTC
T ss_pred             HHCC
T ss_conf             8519