Job Description P77624 Confidence 100.00% Date Thu Jan 5 12:31:13 GMT 2012 Rank 18 Aligned Residues 287 % Identity 14% Template d2cdqa1 SCOP info Carbamate kinase-like Carbamate kinase-like PyrH-like Resolution 2.85

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	V	V	V	A	I	G	G	N	S	I	I	K	D	N	A	S	Q	S	I	E	H	Q	A	E	A	V	K	A	V	A	D	T	V	L	E	M	L	A	S	D	Y	D	I	V	L	T	H	G	N	G	P	Q	V	G	L	D	L	R	R	A	E	I	A	H	K	R	E	G	L	P	L	T	P	L	A	N	C	V
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.											.	.
Template Sequence		I	T	C	V	M	K	F	G	G	S	S	V	A	S	A	.	.	.	.	.	.	.	.	.	.	E	R	M	K	E	V	A	D	L	I	.	.	L	T	F	P	E	E	S	P	V	I	V	L	S	A	M	G	K	T	T	N	N	L	L	L	A	G	E	K	A	V	S	C	G	V	S	N	A	S	E	I	E	E	L
Template Known Secondary structure										T	G	G	G	S	S		.	.	.	.	.	.	.	.	.	.											.	.				T	T										S	T	T													T	T	T		T	T	T	G	G	G
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.											.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.											.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		A	D	T	Q	G	G	I	G	Y	L	I	Q	Q	A	.	.	L	N	N	R	L	A	R	H	G	E	K	K	A	V	T	V	V	T	Q	V	E	V	D	K	N	D	P	G	F	A	H	P	T	K	P	I	G	A	F	F	S	D	S	Q	R	D	E	L	Q	K	A	N	P	D	W	C	F	V	E	D	A	G	R	G
Query Conservation																.	.
Alig confidence																.	.
Template Conservation
Template Sequence		S	I	I	K	E	L	H	I	R	T	V	K	E	L	N	I	D	P	S	V	I	L	T	Y	L	E	E	L	E	Q	L	L	K	G	I	A	M	M	K	E	L	T	L	R	T	R	D	Y	L	V	S	F	G	E	C	L	S	T	R	I	F	A	A	Y	L	N	T	I	G	V	K	A	R	Q	Y	D	A	F	E	I
Template Known Secondary structure																T			S																					T																													T	T								G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.								.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.
Query Sequence		Y	R	R	V	V	A	S	P	E	P	K	R	I	.	.	.	.	.	.	.	V	E	A	P	A	I	K	A	L	I	Q	Q	G	F	V	V	I	G	A	G	G	G	G	I	P	V	V	R	T	D	A	G	D	Y	Q	S	V	D	A	V	I	D	K	D	L	S	T	A	L	L	A	R	E	I	H	A	D	I	L	V
Query Conservation															.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.																						.	.	.	.
Template Conservation																																											.	.	.	.
Template Sequence		G	F	I	T	T	D	D	F	T	N	G	D	I	L	E	A	T	Y	P	A	V	A	K	R	L	Y	D	D	W	M	H	D	P	A	V	P	I	V	T	G	F	.	.	.	.	L	G	K	G	W	K	T	G	A	V	T	T	L	G	R	G	G	S	D	L	T	A	T	T	I	G	K	A	L	G	L	K	E	I	Q
Template Known Secondary structure		T					S		S	T	T			B		T	T																S								S	S	.	.	.	.					T	T	T								T	T														T		S
Template Predicted Secondary structure																																											.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.					.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		234	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		I	T	T	G	V	E	K	V	C	I	H	F	G	K	.	.	P	Q	Q	Q	A	L	D	R	V	D	I	A	T	M	T	R	Y	M	Q	E	G	H	F	P	P	G	S	M	L	P	K	I	I	A	S	L	T	F	L	E	Q	G	G	K	E	V	I	I	T	T	P	E	C	L	P	A	A	L	R	G	E	T	G	T
Query Conservation																.	.
Alig confidence																.	.																						.	.	.								.	.	.																							.	.	.	.	.
Template Conservation																																							.	.	.								.	.	.																							.	.	.	.	.
Template Sequence		V	W	K	D	V	D	G	V	L	T	C	D	P	T	I	Y	K	R	A	T	P	V	P	Y	L	T	F	D	E	A	A	E	L	A	Y	F	G	.	.	.	A	Q	V	L	H	P	Q	.	.	.	S	M	R	P	A	R	E	G	E	I	P	V	R	V	K	N	S	Y	N	P	K	A	.	.	.	.	.	P	G	T
Template Known Secondary structure					S	S	S	S	S	B	S	S		T	T	T		T	T			B																	.	.	.	S	S						.	.	.									T								T	T	S	T	T	S	.	.	.	.	.
Template Predicted Secondary structure																																							.	.	.								.	.	.																							.	.	.	.	.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.				.	.	290	.	.	.	.				.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.						.	.	.
		312	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	I	K	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	T	K	T
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions