 |
Job Description | P77624 | Confidence | 15.86% | Date | Thu Jan 5 12:31:13 GMT 2012 |
Rank | 68 | Aligned Residues | 76 |
% Identity | 13% | Template | d1eo1a_ |
SCOP info | Ribonuclease H-like motif
| Nitrogenase accessory factor-like
| MTH1175-like
|
Resolution | UNK |
|
 |
  |   |
228 | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | A | D | I | L | V | I | T | T | G | V | E | K | V | C | . |
. |
. |
. |
. |
I | H | F | G | K | P | Q | Q | Q | A | L | D | R | V | D | I | A | T | M | T | R | Y | M | Q | E | G | H | F | P | P | G | S | M | L | P | K | I | I | A | S | L | T | F | L | E | Q | G | G | K | E | V | I | I | T | T | P | E | C | L | P |
Query Conservation |   |
  |
|   |   |
|
|   |   |
|
|
|
|
|
|   | . | . | . | . | . |   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |
|
|
|   |   |
|
|   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|
|   |   |   |
|
|   |   | . | . | . |
|   |   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |
|   |
|   |
Template Sequence |   |
R | A | P | Y | F | M | I | V | E | M | K | K | G | N | I | E | S | S | E | V | I | E | N | P | S | A | S | A | S | G | G | A | G | I | R | T | A | Q | I | I | A | N | N | G | V | K | A | V | I | A | S | S | P | G | P | N | . |
. |
. |
A | F | E | V | L | N | E | L | G | I | K | I | Y | R | A | T | G | T | S | V | E |
Template Known Secondary structure |   |
S |
| S |
|  |  |  |  |  |  | S | S | S | S |  |  |  |  |  |  |  |
|
| S |
| T | T | T | S | S | S |
| S | T | T |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
|
| S | S |  |  | . | . | . |  |  |  |  |  |  |  |  | T |
|  |  |  |  |
|
| S |
|
|  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  | . | . | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | |
|
|
. | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
  |
  |   |
303 | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
A | A | L | R |
Query Conservation |   |
  |   |
|   |
Alig confidence |   |
|
|
|
|
Template Conservation |   |
  |
|
|   |
Template Sequence |   |
E | N | L | K |
Template Known Secondary structure |   |
 |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
Template SS confidence |   |
|
|
|
|
  |   |
99 | 100 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|