Job Description P77624 Confidence 100.00% Date Thu Jan 5 12:31:13 GMT 2012 Rank 33 Aligned Residues 221 % Identity 19% Template c3nwyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:uridylate kinase; PDBTitle: structure and allosteric regulation of the uridine monophosphate2 kinase from mycobacterium tuberculosis Resolution 2.54 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	V	V	V	A	I	G	G	N	S	I	I	K	D	N	A	S	Q	S	I	E	H	Q	A	E	A	V	K	A	V	A	D	T	V	L	E	M	L	A	S	D	Y	D	I	V	L	T	H	G	N	G	P	Q	V	G	L	D	L	R	R	A	E	I	A	H	K	R	E	G	L	P	L	T	P	L	A	N	C	V
Query Conservation
Alig confidence																							.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	R	V	L	L	K	L	G	G	E	M	F	G	G	G	Q	V	G	L	D	P	.	.	.	.	D	V	V	A	Q	V	A	R	Q	I	A	D	V	V	R	G	G	V	Q	I	A	V	V	I	G	G	G	N	F	F	R	G	A	Q	L	Q	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S								S	T	T	S	S	T	T	S	S	S				.	.	.	.																T	T										T	T	T			S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.					.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	T	Q	G	G	I	G	Y	L	I	Q	Q	A	L	N	N	R	L	A	R	H	G	E	K	K	A	V	T	V	V	T	Q	V	E	V	D	K	N	D	P	G	F	A	H	P	T	K	P	I	G	A	F	F	S	D	S	Q	R	D	E	L	Q	K	A	N	P	D	W	C	F	V	E	D	A	G	R	G	Y	R
Query Conservation
Alig confidence		.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	G	M	E	R	T	R	S	D	Y	M	G	M	L	G	T	V	M	N	S	L	A	L	Q	D	F	L	E	K	E	G	I	V	T	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q
Template Known Secondary structure		.	.	.	.	.	T	S																											T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.																																								.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	V	A	S	P	E	P	K	R	I	V	E	A	P	A	I	K	A	L	I	Q	Q	G	F	V	V	I	G	A	G	G	G	G	I	P	V	V	R	T	D	A	G	D	Y	Q	S	V	D	A	V	I	D	K	D	L	S	T	A	L	L	A	R	E	I	H	A	D	I	L	V	I	T	T	G	V	E	K	V	C
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	A	I	T	M	G	Q	V	A	E	P	Y	L	P	L	R	A	V	R	H	L	E	K	G	R	V	V	I	F	G	A	G	M	G	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	F	S	T	D	T	T	A	A	Q	R	A	L	E	I	G	A	D	V	V	L	M	A	K	A	V	D	G	V	F
Template Known Secondary structure			S	S			T	T	T	S														T	T							S	T	T	S		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T															T		S							S	S	S	S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.															.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.				.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.
Predicted Secondary structure																																																									.	.	.												.
Query SS confidence																																																									.	.	.												.
Query Sequence		I	H	F	G	K	P	Q	Q	Q	A	L	D	R	V	D	I	A	T	M	T	R	Y	M	Q	E	G	H	F	P	P	G	S	M	L	P	K	I	I	A	S	L	T	F	L	E	Q	G	G	K	E	V	I	I	T	T	.	.	.	P	E	C	L	P	A	A	L	R	G	E	.	T	G	T	H	I	I
Query Conservation																																																									.	.	.												.
Alig confidence							.	.	.															.	.	.	.	.	.	.	.											.															.	.	.												.
Template Conservation							.	.	.															.	.	.	.	.	.	.	.											.
Template Sequence		A	E	D	P	A	.	.	.	E	L	L	T	A	V	S	H	R	E	V	L	D	R	.	.	.	.	.	.	.	.	G	L	R	V	A	D	A	T	A	F	.	S	L	C	M	D	N	G	M	P	I	L	V	F	N	L	L	T	D	G	N	I	A	R	A	V	R	G	E	K	I	G	T	L	V	T
Template Known Secondary structure		S	S				.	.	.				S										T	.	.	.	.	.	.	.	.	T				S						.						T	T								S	S	S	T	T							T	T				S
Template Predicted Secondary structure							.	.	.															.	.	.	.	.	.	.	.											.
Template SS confidence
		192	.	.	.	.				.	.	.	200	.	.	.	.	.	.	.	.	.	210									.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions