Job Description P77624 Confidence 100.00% Date Thu Jan 5 12:31:13 GMT 2012 Rank 39 Aligned Residues 220 % Identity 16% Template c2va1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:uridylate kinase; PDBTitle: crystal structure of ump kinase from ureaplasma parvum Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	L	V	V	V	A	I	G	G	N	S	I	I	K	D	N	A	S	Q	S	I	E	H	Q	A	E	A	V	K	A	V	A	D	T	V	L	E	M	L	A	S	D	Y	D	I	V	L	T	H	G	N	G	P	Q	V	G	L	D	L	R	R	A	E	I	A	H	K	R	E	G	L	P	L	T	P	L	A	N	C
Query Conservation
Alig confidence																					.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	Q	R	I	V	I	K	I	S	G	A	C	L	K	Q	N	D	S	S	.	.	.	I	I	D	F	I	K	I	N	D	L	A	E	Q	I	E	K	I	S	K	K	Y	I	V	S	I	V	L	G	G	G	N	I	W	R	G	S	I	A	K	E	L	D	M	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S								G	G	G	G		S	S	T	T		.	.	.	S	S																T	T	T	S									T	T	T									T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.				.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	D	T	Q	G	G	I	G	Y	L	I	Q	Q	A	L	N	N	R	L	A	R	H	G	E	K	K	A	V	T	V	V	T	Q	V	E	V	D	K	N	D	P	G	F	A	H	P	T	K	P	I	G	A	F	F	S	D	S	Q	R	D	E	L	Q	K	A	N	P	D	W	C	F	V	E	D	A	G	R	G	Y
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	R	N	L	A	D	N	M	G	M	M	A	T	I	I	N	G	L	A	L	E	N	A	L	N	H	L	N	V	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.																									T	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
											66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.																																								.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		R	R	V	V	A	S	P	E	P	K	R	I	V	E	A	P	A	I	K	A	L	I	Q	Q	G	F	V	V	I	G	A	G	G	G	G	I	P	V	V	R	T	D	A	G	D	Y	Q	S	V	D	A	V	I	D	K	D	L	S	T	A	L	L	A	R	E	I	H	A	D	I	L	V	I	T	T	G	.	V	E	K
Query Conservation																																																																														.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	A	I	K	C	D	K	L	V	H	E	S	S	A	N	N	I	K	K	A	I	E	K	E	Q	V	M	I	F	V	A	G	T	G	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	F	T	T	D	S	C	A	A	I	R	A	A	E	T	E	S	S	I	I	L	M	G	K	N	G	V	D	G
Template Known Secondary structure				S	S			T	T	T															T	T							S	T	T	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S															T		S							S	S			S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.															.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.				.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.												.
Query SS confidence																																																											.	.	.												.
Query Sequence		V	C	I	H	F	G	K	P	Q	Q	Q	A	L	D	R	V	D	I	A	T	M	T	R	Y	M	Q	E	G	H	F	P	P	G	S	M	L	P	K	I	I	A	S	L	T	F	L	E	Q	G	G	K	E	V	I	I	T	T	.	.	.	P	E	C	L	P	A	A	L	R	G	E	.	T	G	T	H	I	I	K
Query Conservation																																																											.	.	.												.
Alig confidence								.	.	.	.	.	.													.	.	.	.	.	.	.	.											.															.	.	.												.
Template Conservation								.	.	.	.	.	.													.	.	.	.	.	.	.	.											.
Template Sequence		V	Y	D	S	D	F	.	.	.	.	.	.	Y	E	H	I	T	F	N	M	A	L	T	Q	.	.	.	.	.	.	.	.	N	L	K	V	M	D	A	T	A	L	.	A	L	C	Q	E	N	N	I	N	L	L	V	F	N	I	D	K	P	N	A	I	V	D	V	L	E	K	K	N	K	Y	T	I	V	S	K
Template Known Secondary structure		B		S				.	.	.	.	.	.	B	S											.	.	.	.	.	.	.	.	T			S	S						.						T	T								S	S	S	T	T							T	T		S
Template Predicted Secondary structure								.	.	.	.	.	.													.	.	.	.	.	.	.	.											.
Template SS confidence
		164	.	.	.	.	.							170	.	.	.	.	.	.	.	.	.	180	.									.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions