Job Description P77624 Confidence 99.97% Date Thu Jan 5 12:31:13 GMT 2012 Rank 41 Aligned Residues 200 % Identity 19% Template c2j4kC_ PDB info PDB header:transferase Chain: C: PDB Molecule:uridylate kinase; PDBTitle: crystal structure of uridylate kinase from sulfolobus2 solfataricus in complex with ump to 2.2 angstrom3 resolution Resolution 2.2 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	E	L	V	V	V	A	I	G	G	N	S	I	I	K	D	N	A	S	Q	S	I	E	H	Q	A	E	A	V	K	A	V	A	D	T	V	L	E	M	L	A	S	D	Y	D	I	V	L	T	H	G	N	G	P	Q	V	G	L	D	L	R	R	A	E	I	A	H	K	R	E	G	L	P	L	T	P	L	A	N
Query Conservation
Alig confidence				.	.																.	.	.	.	.	.	.	.																																						.	.	.	.
Template Conservation				.	.																.	.	.	.	.	.	.	.																																						.	.	.	.
Template Sequence		M	N	.	.	I	I	L	K	I	S	G	K	F	F	D	E	D	N	V	.	.	.	.	.	.	.	.	D	N	L	I	V	L	R	Q	S	I	K	E	L	A	D	N	G	F	R	V	G	I	V	T	G	G	G	S	T	A	R	R	Y	I	K	L	A	.	.	.	.	R	E	I	G	I	G	E	A	Y	L	D	L
Template Known Secondary structure				.	.							G	G	G	G	T	T	T			.	.	.	.	.	.	.	.																T	T																					.	.	.	.			T	T
Template Predicted Secondary structure				.	.																.	.	.	.	.	.	.	.																																						.	.	.	.
Template SS confidence
		1	.			.	.	.	.	.	.	.	10	.	.	.	.	.	.	.									.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.					.	.	.	.	.	60	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		C	V	A	D	T	Q	G	G	I	G	Y	L	I	Q	Q	A	L	N	N	R	L	A	R	H	G	E	K	K	A	V	T	V	V	T	Q	V	E	V	D	K	N	D	P	G	F	A	H	P	T	K	P	I	G	A	F	F	S	D	S	Q	R	D	E	L	Q	K	A	N	P	D	W	C	F	V	E	D	A	G	R	G
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	I	W	A	S	R	L	N	A	Y	L	V	M	F	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	R	V	V	A	S	P	E	P	K	R	I	V	E	A	P	A	I	K	A	L	I	Q	Q	G	F	V	V	I	G	A	G	G	G	G	I	P	V	V	R	T	D	A	G	D	Y	Q	S	V	D	A	V	I	D	K	D	L	S	T	A	L	L	A	R	E	I	H	A	D	I	L	V	I	T	T	G	V	E	K
Query Conservation
Alig confidence		.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	Q	D	L	A	Y	M	H	V	P	Q	S	L	E	E	F	I	Q	D	W	S	H	G	K	V	V	V	T	G	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	G	Q	S	T	A	A	V	A	A	L	V	A	E	A	S	S	S	K	T	L	V	V	A	T	N	V	D	G
Template Known Secondary structure		.	.	.	.	T	T	T	B		S				S	S									T	T	S	S	B							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T	S													T	T		S							S	S
Template Predicted Secondary structure		.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.																	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.				.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.
Predicted Secondary structure																																																											.	.	.												.
Query SS confidence																																																											.	.	.												.
Query Sequence		V	C	I	H	F	G	K	P	Q	Q	Q	A	L	D	R	V	D	I	A	T	M	T	R	Y	M	Q	E	G	H	F	P	P	G	S	M	L	P	K	I	I	A	S	L	T	F	L	E	Q	G	G	K	E	V	I	I	T	T	.	.	.	P	E	C	L	P	A	A	L	R	G	E	.	T	G	T	H	I	I
Query Conservation																																																											.	.	.												.
Alig confidence									.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.														.							.	.	.												.
Template Conservation									.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Sequence		V	Y	E	K	D	P	R	.	.	.	I	Y	I	P	H	L	T	T	Q	D	L	R	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	L	A	I	K	I	V	E	R	S	K	I	.	R	V	I	V	M	N	Y	R	K	L	N	R	I	I	D	I	L	K	G	E	E	V	S	S	I	I	E
Template Known Secondary structure				S	S		T	T	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.											T	T		.							G	G	G	G	G	G							T		S	S
Template Predicted Secondary structure									.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
		144	.	.	.	.	.	150				.	.	.	.	.	.	.	.	.	160	.	.	.	.														.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions