Job Description P61316 Confidence 3.00% Date Thu Jan 5 12:07:20 GMT 2012 Rank 48 Aligned Residues 39 % Identity 13% Template c3qfqE_ PDB info PDB header:dna binding protein/dna Chain: E: PDB Molecule:large t antigen; PDBTitle: asymmetric assembly of merkel cell polyomavirus large t-antigen origin2 binding domains at the viral origin Resolution 2.90 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	D	L	K	S	R	L	D	K	V	S	S	F	H	A	S	F	T	Q	K	V	T	D	G	S	G	A	A	V	Q	E	G	Q	G	D	L	W	V	K	R	P	N	L	F	N
Query Conservation
Alig confidence																												.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.
Template Sequence		S	D	K	A	I	E	L	Y	D	K	I	E	K	F	K	V	D	F	K	S	R	H	A	C	E	L	.	.	.	.	.	.	.	G	C	I	L	L	F	I	T	L	S	K	H	R
Template Known Secondary structure											T	T	G	G	G										B	T	T	.	.	.	.	.	.	.	B
Template Predicted Secondary structure																												.	.	.	.	.	.	.
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.								.	.	370	.	.	.	.	.	.	.	.	.	380

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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