Job Description P61316 Confidence 58.29% Date Thu Jan 5 12:07:20 GMT 2012 Rank 7 Aligned Residues 158 % Identity 13% Template c3mhaB_ PDB info PDB header:lipid binding protein Chain: B: PDB Molecule:lipoprotein lprg; PDBTitle: crystal structure of lprg from mycobacterium tuberculosis bound to pim Resolution 1.85 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.						.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																																										.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.
Query Sequence		S	V	W	A	D	A	A	S	D	L	K	S	R	L	D	K	V	S	S	F	H	A	S	F	T	Q	K	V	T	D	G	S	G	A	A	V	Q	E	G	Q	G	D	L	W	V	K	R	P	N	L	F	N	W	H	M	T	.	.	.	.	.	Q	P	D	E	S	I	L	V	S	D	G	K	T	L	W	F	Y	N	P
Query Conservation																																																										.	.	.	.	.
Alig confidence																																						.									.											.	.	.	.	.
Template Conservation																																						.									.
Template Sequence		P	D	A	K	P	L	V	E	E	A	T	A	Q	T	K	A	L	K	S	A	H	M	V	L	T	V	N	G	K	I	P	G	L	S	L	K	.	T	L	S	G	D	L	T	T	.	N	P	T	A	A	T	G	N	V	K	L	T	L	G	G	S	D	I	D	A	D	F	V	V	F	D	G	I	L	Y	A	T	L	T
Template Known Secondary structure																	T												S			S	S					.								T	.	T	T	T											T	T											T	T
Template Predicted Secondary structure																																						.									.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110								.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.														.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	V	E	Q	A	T	A	T	W	L	K	D	A	T	G	N	T	P	.	.	.	.	.	.	.	F	M	L	I	A	R	N	Q	S	S	D	W	Q	Q	Y	N	I	K	Q	N	G	D	D	F	V	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	A	S	N	G	N	L	K	Q	F	T	I	N	V
Query Conservation																				.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	N	Q	W	S	D	F	G	P	A	A	D	I	Y	D	P	A	Q	V	L	N	P	D	T	G	L	A	N	V	L	A	N	F	A	D	A	K	A	E	G	R	D	T	I	N	G	Q	N	T	I	R	I	S	G	K	V	S	A	Q	A	V	N	Q	I	A	P	P	F	N	A	T	Q	P	V	P	A	T	V	W	I
Template Known Secondary structure		T	T								G	G	G	T			G	G	G	G	G		T	T	T	S							T													T	T																				T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		153	.	.	.			.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		G	R	D	G	.	.	T	I	H	Q	F	S	A	V	E	Q	D	D	Q	R	S	S	Y	Q	L	K	S
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		Q	E	T	G	D	H	Q	L	A	Q	A	Q	L	D	R	G	S	G	N	S	V	Q	M	T	L	S	K
Template Known Secondary structure			S	S	T	T											S	T	T
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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