Job Description P61316 Confidence 99.69% Date Thu Jan 5 12:07:20 GMT 2012 Rank 3 Aligned Residues 170 % Identity 14% Template c3buuB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized lola superfamily protein ne2245; PDBTitle: crystal structure of lola superfamily protein ne2245 from2 nitrosomonas europaea Resolution 1.20 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.				.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																																														.	.	.
Query SS confidence																																																														.	.	.
Query Sequence		S	S	V	W	A	D	A	A	S	D	L	K	S	R	L	D	K	V	S	S	F	H	A	S	F	T	Q	K	V	T	D	G	S	G	A	A	V	Q	E	G	Q	G	D	L	W	V	K	R	P	N	L	F	N	W	H	M	T	Q	P	D	.	.	.	E	S	I	L	V	S	D	G	K	T	L	W	F	Y	N	P	F
Query Conservation																																																														.	.	.
Alig confidence																																					.																									.	.	.
Template Conservation																																					.
Template Sequence		A	V	T	A	Q	S	I	L	E	K	A	D	E	I	R	F	P	Q	D	S	F	Q	V	N	V	A	I	R	T	A	A	P	D	H	A	.	E	D	L	Y	R	Y	Q	V	L	S	K	G	N	E	N	S	I	V	X	I	T	E	P	A	S	E	R	G	Q	A	I	L	X	K	G	R	D	L	W	V	F	X	P	S
Template Known Secondary structure																	S		S	S													T	T	S		.												T	T	T									S	T	T	T	T	T							T	T							T	T
Template Predicted Secondary structure																																					.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.										.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.																										.
Query SS confidence																																								.	.	.	.	.	.	.	.	.																										.
Query Sequence		V	E	Q	A	T	A	T	W	L	K	D	A	T	G	N	T	P	F	M	L	I	A	R	N	Q	S	S	D	W	Q	Q	Y	N	I	K	Q	N	G	.	.	.	.	.	.	.	.	.	D	D	F	V	L	T	P	K	A	S	N	G	N	L	K	Q	F	T	I	N	V	G	R	D	G	.	T	I	H	Q	F	S	A
Query Conservation																																								.	.	.	.	.	.	.	.	.																										.
Alig confidence																											.													.	.	.	.	.	.	.	.	.																										.
Template Conservation																											.
Template Sequence		V	S	Q	P	I	R	L	S	L	S	Q	R	L	T	G	Q	V	A	N	G	D	I	A	R	A	.	N	F	T	G	D	Y	H	P	Q	L	L	R	N	E	S	I	D	D	E	D	Y	Y	V	L	E	L	T	G	I	D	R	S	V	T	Y	Q	K	V	L	L	W	V	N	Q	S	N	F	R	P	Y	K	A	E	F
Template Known Secondary structure			S	S						S	S	S				T	T										.		S	B	T	T												T	T											S	S	T	T	S	S		S								T	T	T
Template Predicted Secondary structure																											.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		164	.	.	.	.																																	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query Sequence		V	E	Q	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	S	S	Y	Q	L	K	S	.	Q	Q	N	G	A	V	D	A	A	K	F	T
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.				.
Template Conservation																																																				.
Template Sequence		Y	S	V	S	G	R	L	L	K	T	S	R	Y	E	N	F	D	N	I	L	G	E	X	R	P	T	R	I	I	X	E	D	A	L	K	S	G	E	V	S	V	L	D	Y	S	D	X	K	L	R	.	D	L	P	D	K	I	F	T
Template Known Secondary structure				T	T	S															T	T												S	S	S	S															.				G	G	G		S
Template Predicted Secondary structure																																																				.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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