Job Description P61316 Confidence 100.00% Date Thu Jan 5 12:07:20 GMT 2012 Rank 2 Aligned Residues 174 % Identity 35% Template c2w7qB_ PDB info PDB header:protein transport Chain: B: PDB Molecule:outer-membrane lipoprotein carrier protein; PDBTitle: structure of pseudomonas aeruginosa lola Resolution 1.88 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	A	A	S	D	L	K	S	R	L	D	K	V	S	S	F	H	A	S	F	T	Q	K	V	T	D	G	S	G	A	A	V	Q	E	G	Q	G	D	L	W	V	K	R	P	N	L	F	N	W	H	M	T	Q	P	D	E	S	I	L	V	S	D	G	K	T	L	W	F	Y	N	P	F	V	E	Q	A	T	A	T
Query Conservation
Alig confidence																																																															.
Template Conservation																																																															.
Template Sequence		S	A	A	V	Q	R	L	T	G	L	L	N	K	A	Q	T	L	T	A	R	F	S	Q	L	T	L	D	G	S	G	T	R	L	Q	E	T	A	G	Q	L	S	L	K	R	P	G	L	F	R	W	H	T	D	A	P	N	E	Q	L	L	I	.	S	N	E	K	V	W	L	Y	D	P	D	L	E	Q	V	T	I	Q
Template Known Secondary structure														T		S													T	T	S														T	T	T								T	T	S						.										T	T	T	T
Template Predicted Secondary structure																																																															.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.																							.
Query SS confidence																																	.	.	.	.																							.
Query Sequence		W	L	K	D	A	T	G	N	T	P	F	M	L	I	A	R	N	Q	S	S	D	W	Q	Q	Y	N	I	K	Q	N	G	.	.	.	.	D	D	F	V	L	T	P	K	A	S	N	G	N	L	K	Q	F	T	I	N	V	G	.	R	D	G	T	I	H	Q	F	S	A	V	E	Q	D	D	Q	R	S	S	Y	Q	L
Query Conservation																																	.	.	.	.																							.
Alig confidence																																	.	.	.	.												.	.	.	.	.	.						.
Template Conservation																																																.	.	.	.	.	.
Template Sequence		K	L	D	Q	R	L	T	Q	T	P	A	L	L	L	S	G	D	I	S	K	I	S	E	S	F	A	I	T	Y	K	E	G	G	N	V	V	D	F	V	L	K	P	K	L	F	D	.	.	.	.	.	.	T	L	R	L	S	F	R	S	G	K	V	N	D	M	Q	M	I	D	G	V	G	Q	R	T	N	I	L	F
Template Known Secondary structure							T	T	T		G	G	G	G	G	G	S						T	T	T									T	T													.	.	.	.	.	.								T	T										T	T
Template Predicted Secondary structure																																																.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.							.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		176	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		K	S	.	Q	Q	N	G	A	V	D	A	A	K	F	T	F	T	P	P	Q	G	V	T	V	D	D	Q
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		F	D	V	K	M	N	E	A	L	D	A	K	Q	F	T	F	D	V	P	P	G	V	D	V	I	Q	E
Template Known Secondary structure							S					G	G	G	G						T	T
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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