Job Description P61316 Confidence 98.99% Date Thu Jan 5 12:07:20 GMT 2012 Rank 5 Aligned Residues 160 % Identity 10% Template c2v43A_ PDB info PDB header:regulator Chain: A: PDB Molecule:sigma-e factor regulatory protein rseb; PDBTitle: crystal structure of rseb: a sensor for periplasmic stress2 response in e. coli Resolution 2.37 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		V	W	A	D	A	A	S	D	L	K	S	R	L	D	K	V	S	S	F	H	A	S	F	T	Q	K	V	T	D	G	S	G	A	A	V	Q	E	G	Q	G	D	L	W	V	K	R	P	N	L	F	.	N	W	H	M	T	Q	P	D	E	S	I	L	V	S	D	G	K	T	L	W	F	Y	N	P	F	V	E	Q	A
Query Conservation																																																				.
Alig confidence																		.										.	.	.	.																					.
Template Conservation																		.										.	.	.	.
Template Sequence		A	S	G	A	L	L	Q	Q	M	N	L	A	S	Q	S	L	.	N	Y	E	L	S	F	I	S	I	.	.	.	.	N	K	Q	G	V	E	S	L	R	Y	R	H	A	R	L	D	N	R	P	L	A	Q	L	L	Q	M	D	G	P	R	R	E	V	V	Q	R	G	N	E	I	S	Y	F	E	P	G	L	E	P	F
Template Known Secondary structure																	S	.										.	.	.	.		T	T													T	T										S	S	S								T	T							T	T	S
Template Predicted Secondary structure																		.										.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.										.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.																							.
Query SS confidence																																						.	.	.	.	.	.	.	.	.																							.
Query Sequence		T	A	T	W	L	K	D	A	T	G	N	T	P	F	M	L	I	A	R	N	Q	S	S	D	W	Q	Q	Y	N	I	K	Q	N	G	D	D	.	.	.	.	.	.	.	.	.	F	V	L	T	P	K	A	S	N	G	N	L	K	Q	F	T	I	N	V	G	R	D	.	G	T	I	H	Q	F	S	A	V	E	Q	D
Query Conservation																																						.	.	.	.	.	.	.	.	.																							.
Alig confidence				.	.																																	.	.	.	.	.	.	.	.	.											.	.											.
Template Conservation				.	.																																																				.	.
Template Sequence		T	L	.	.	N	G	D	Y	I	V	D	S	L	P	S	L	I	Y	T	D	F	K	R	L	S	P	Y	Y	D	F	I	S	V	G	R	T	R	I	A	D	R	L	C	E	V	I	R	V	V	A	R	D	G	T	R	.	.	Y	S	Y	I	V	W	M	D	T	E	S	K	L	P	M	R	V	D	L	L	D	R	D
Template Known Secondary structure				.	.			S	S		T	T	S	S		G	G	G	G							T	T	T												T	T											T	T	S		S	.	.									T	T	T											T	T
Template Predicted Secondary structure				.	.																																																				.	.
Template SS confidence
		101	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		168	.	170	.		.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure						.					.
Query SS confidence						.					.
Query Sequence		D	Q	R	S	.	S	Y	Q	L	.	K	S	Q	Q	N	G	A	V	D	A	A	K
Query Conservation						.					.
Alig confidence						.					.
Template Conservation
Template Sequence		G	E	T	L	E	Q	F	R	V	I	A	F	N	V	N	Q	D	I	S	S	S	M
Template Known Secondary structure		S															S	S
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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