Job Description P09127 Confidence 1.87% Date Thu Jan 5 11:01:53 GMT 2012 Rank 91 Aligned Residues 174 % Identity 11% Template c3k66A_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:beta-amyloid-like protein; PDBTitle: x-ray crystal structure of the e2 domain of c. elegans apl-1 Resolution 2.70 Å

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		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	W	L	L	A	Q	A	D	F	L	V	K	L	A	G	R	K	L	W	S	D	Q	D	V	T	T	A	A	A	L	L	K	S	A	D	A	S	L	A	D	M	N	D	P	S	L	I	T	V	R	R	A	I	T	D	D	I	A	S	L	S	A	V	S	Q	V	D	Y	D	G	I	I	L	K	L	N	Q	L	S
Query Conservation
Alig confidence												.	.	.	.	.	.	.																										.	.	.	.																						.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.																										.	.	.	.																						.	.	.	.	.	.	.
Template Sequence		K	E	W	G	D	L	E	T	R	Y	.	.	.	.	.	.	.	N	E	Q	K	A	K	D	P	K	G	A	E	K	F	K	S	Q	M	N	A	R	F	Q	K	T	.	.	.	.	V	S	S	L	E	E	E	H	K	R	M	R	K	E	I	E	A	V	H	E	E	.	.	.	.	.	.	.	R	V	Q	A	M	L
Template Known Secondary structure												.	.	.	.	.	.	.							S																			.	.	.	.																						.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.																										.	.	.	.																						.	.	.	.	.	.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280								.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.					.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.								.	.	.	330	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.			.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		N	Q	V	D	N	L	R	L	A	D	N	D	S	D	G	.	.	S	P	M	D	S	D	G	E	E	L	S	S	S	I	S	E	W	R	I	N	L	Q	K	S	W	Q	N	F	M	D	N	F	I	T	I	R	R	R	D	D	T	A	V	P	L	L	A	P	N	Q	D	I	Y	L	R	E	N	I	R	S	R	L	L
Query Conservation																	.	.
Alig confidence																	.	.
Template Conservation
Template Sequence		N	E	K	K	R	D	A	T	H	D	Y	R	Q	A	L	A	T	H	V	N	K	P	N	K	H	S	V	L	Q	S	L	K	A	Y	I	R	A	E	E	K	D	R	M	H	T	L	N	R	Y	R	H	L	L	K	A	D	S	K	E	A	A	A	Y	K	P	T	V	I	H	R	L	R	Y	I	D	L	R	I	N	G
Template Known Secondary structure																						S																																									T	T
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	A	Q	A	V	P	R	H	Q	E	E	T	Y	R	Q	A	L	E	N	V	S	T	W	V	R	A	Y	Y	D	T	D	D	A	T	T
Query Conservation
Alig confidence			.	.
Template Conservation			.	.
Template Sequence		T	.	.	L	A	M	L	R	D	F	P	D	L	E	K	Y	V	R	P	I	A	V	T	Y	W	K	D	Y	R	D	E	V	S	P	D	I
Template Known Secondary structure			.	.			T	T	T	T						T	T	T																S
Template Predicted Secondary structure			.	.
Template SS confidence
		413			.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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