Job Description P0A8S9 Confidence 5.36% Date Thu Jan 5 11:08:38 GMT 2012 Rank 20 Aligned Residues 61 % Identity 31% Template c2avuF_ PDB info PDB header:transcription activator Chain: F: PDB Molecule:flagellar transcriptional activator flhc; PDBTitle: structure of the escherichia coli flhdc complex, a2 prokaryotic heteromeric regulator of transcription Resolution 3.00 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	K	H	I	Y	D	I	N	L	S	Y	L	L	L	A	Q	R	L	I	V	Q	D	K	A	S	A	M	F	R	L	G	I	N	E	E	M	A	T	T	L	A	A	L	T	L	P	Q	M	V	K	L	A	E	T	N	Q	L	V	C	H	F	R	F	D	S	H	Q	T	I	T	Q	L	T	Q	D	S	R	V	D
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	V	Q	E	A	R	D	I	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	M	E	L	I	T	L	G	A	R	L	Q	M	L	E	S	E	T	Q	L	S	R	G	R	L	I	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	K	E	L	R	G	S	P	P	P	K
Template Known Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.							T				S	T	T							S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.															.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																		.	.	.	.	.	.	50	.	.	.	.
														86	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	D	L	Q	Q	I	H	T	G	I	M	L	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	M	L	P	F	S	T	D	W	F	M	T	W	E	Q	N	V	H	A	S	M	F	C	N
Template Known Secondary structure								S	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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