Return to main results Retrieve Phyre Job Id

Job DescriptionP0AG51
Confidence98.92%DateThu Jan 5 11:28:09 GMT 2012
Rank8Aligned Residues58
% Identity19%Templatec3jywF_
PDB info PDB header:ribosomeChain: F: PDB Molecule:60s ribosomal protein l7(a); PDBTitle: structure of the 60s proteins for eukaryotic ribosome based on cryo-em2 map of thermomyces lanuginosus ribosome at 8.9a resolution
Resolution8.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........
Predicted Secondary structure 

















Query SS confidence 

























































Query Sequence  AKTIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAIRGMINAVSFMVKVEE
Query Conservation 

 







 

 
   
 

  


 
    
   


 
 


 





 


Alig confidence 

























































Template Conservation 
 
 






   
 


 


 



  

  



 
     


 







 
Template Sequence  AGLVFVVRIKGINKIPPKPRKVLQLLRLTRINSGTFVKVTKATLELLKLIEPYVAYGY
Template Known Secondary structure 








S
SS


GGG


SSS
B




SSTTTTTTTTS

Template Predicted Secondary structure 




















Template SS confidence 

























































   5960.........70.........80.........90.........100.........110......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions