Job Description P76128 Confidence 100.00% Date Thu Jan 5 12:19:19 GMT 2012 Rank 2 Aligned Residues 482 % Identity 27% Template d1dpea_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		D	M	L	V	I	G	K	A	A	D	P	Q	T	L	D	P	A	V	T	I	D	N	N	D	W	T	V	T	Y	.	P	S	Y	Q	R	L	V	Q	Y	K	T	D	G	D	K	G	S	T	D	V	E	G	D	L	A	S	S	W	K	A	S	D	D	Q	K	E	W	T	F	T	L	K	D	N	A	K	F	A	D	G
Query Conservation																															.
Alig confidence																															.													.	.	.	.
Template Conservation																																												.	.	.	.
Template Sequence		K	T	L	V	Y	C	S	E	G	S	P	E	G	F	N	P	Q	L	F	I	S	G	T	T	Y	D	A	S	S	V	P	L	Y	N	R	L	V	E	F	K	I	G	.	.	.	.	T	T	E	V	I	P	G	L	A	E	K	W	E	V	S	E	D	G	K	T	Y	T	F	H	L	R	K	G	V	K	W	H	D	N
Template Known Secondary structure									S	S			S		S		G	G	G										T								S					T	T	.	.	.	.	S	S					S	S								T	T	S									S	S
Template Predicted Secondary structure																																												.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		109							110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130														.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	.	.	.	.	.	.	P	V	T	A	E	A	V	K	L	S	F	E	R	L	L	K	I	G	Q	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	A	F	P	K	D	L	K	I	D	A	P	D	E	H	T	V	K	F	T	L	S	Q	P	F	A	P	F	L	Y	T	L	A	N	D	G	A	S
Query Conservation			.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	E	F	K	P	T	R	E	L	N	A	D	D	V	V	F	S	F	D	R	Q	K	N	A	Q	N	P	Y	H	K	V	S	G	G	S	Y	E	Y	F	E	G	M	G	L	P	E	L	I	S	E	V	K	K	V	D	D	N	T	V	Q	F	V	L	T	R	P	E	A	P	F	L	A	D	L	A	M	D	F	A	S
Template Known Secondary structure		S	S				S	S																	T	T	S	T	T	T	T	G	G	G									T	T													T	T							S	S			T	T					T	T	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	N	P	A	V	L	K	E	H	A	A	D	D	A	R	G	F	L	A	Q	N	T	A	G	S	G	P	F	M	L	K	S	W	Q	K	G	Q	Q	L	V	L	V	P	N	P	H	Y	P	G	N	K	P	N	F	K	R	V	S	V	K	I	I	G	E	S	A	S	R	R	L	Q	L	S	R	G	D	I	D	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	S	K	E	Y	A	D	A	M	M	K	A	G	T	P	E	K	L	D	L	N	P	I	G	T	G	P	F	Q	L	Q	Q	Y	Q	K	D	S	R	I	R	Y	K	A	F	D	G	Y	W	G	T	K	P	Q	I	D	T	L	V	F	S	I	T	P	D	A	S	V	R	Y	A	K	L	Q	K	N	E	C	Q	V
Template Known Secondary structure														T	T		T	T					S				S	S	S								T	T	T								T	T		S	S				S		S																			T	T	S		S	B
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	A	L	P	V	D	Q	L	N	A	L	K	Q	E	N	K	V	N	V	A	E	Y	P	S	L	R	V	T	Y	L	Y	L	N	N	S	K	A	P	L	N	Q	A	D	L	R	R	A	I	S	W	S	T	D	Y	Q	G	M	V	N	G	I	L	S	G	N	G	K	Q	M	R	G	P	I	P	E	G	M	W	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	P	Y	P	N	P	A	D	I	A	R	M	K	Q	D	K	S	I	N	L	M	E	M	P	G	L	N	V	G	Y	L	S	Y	N	V	Q	K	K	P	L	D	D	V	K	V	R	Q	A	L	T	Y	A	V	N	K	D	A	I	I	K	A	V	Y	Q	G	A	G	V	S	A	K	N	L	I	P	P	T	M	W	G
Template Known Secondary structure			S	S			G	G	G								T	T									S									T	T	S	T	T	T	T	S										T	S											T	T	S					S	S	S	S		T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.						.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.
Query SS confidence																														.	.	.	.	.
Query Sequence		Y	D	A	T	A	M	Q	Y	N	H	D	E	T	K	A	K	A	E	W	D	K	V	T	S	K	P	T	S	.	.	.	.	.	L	T	F	L	Y	S	D	N	D	P	N	W	E	P	I	A	L	A	T	Q	S	S	L	N	K	L	G	I	I	V	K	L	E	K	L	A	N	A	T	M	R	D	R	V	G	K	G
Query Conservation																														.	.	.	.	.
Alig confidence																														.	.	.	.	.
Template Conservation
Template Sequence		Y	N	D	D	V	Q	D	Y	T	Y	D	P	E	K	A	K	A	L	L	K	E	A	G	L	E	K	G	F	S	I	D	L	W	A	M	P	V	Q	R	P	Y	N	P	N	A	R	R	M	A	E	M	I	Q	A	D	W	A	K	V	G	V	Q	A	K	I	V	T	Y	E	W	G	E	Y	L	K	R	A	K	D	G
Template Known Secondary structure				T	T																		T	T		T	T										S	S		B	T	T	B	S															T	T	T																			T	T
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	D	I	A	I	G	N	W	S	P	D	F	A	D	P	Y	M	F	M	N	Y	W	F	E	S	D	K	K	G	L	P	G	N	R	S	F	Y	E	N	S	E	V	D	K	L	L	R	N	A	L	A	T	T	D	Q	T	Q	R	T	R	D	Y	Q	Q	A	Q	K	I	V	I	D	D	A	A	Y	V	Y	L	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	H	Q	T	V	M	M	G	W	T	G	D	N	G	D	P	D	N	F	F	A	T	E	F	S	C	A	A	S	E	Q	G	S	N	Y	S	K	W	C	Y	K	P	F	E	D	L	I	Q	P	A	R	A	T	D	D	H	N	K	R	V	E	L	Y	K	Q	A	Q	V	V	M	H	D	Q	A	P	A	L	I	I	A
Template Known Secondary structure				S									S	S	S		T									S							T			T	T																																							S
Template Predicted Secondary structure
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	N	Y	Q	L	A	M	N	K	E	V	K	G	F	V	F	N	P	M	L	E	Q	V	F	N	I	N	T	M	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	S	T	V	F	E	P	V	R	K	E	V	K	G	Y	V	V	D	P	L	G	K	H	H	F	E	N	V	S	I	E
Template Known Secondary structure											T	T			S					T	T	S					T	T
Template Predicted Secondary structure
Template SS confidence
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.