Job Description P76128 Confidence 100.00% Date Thu Jan 5 12:19:19 GMT 2012 Rank 13 Aligned Residues 462 % Identity 21% Template c3rqtA_ PDB info PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: 1.5 angstrom crystal structure of the complex of ligand binding2 component of abc-type import system from staphylococcus aureus with3 nickel and two histidines Resolution 1.50 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	M	L	V	I	G	K	A	A	D	P	Q	T	L	D	P	A	V	T	I	D	N	N	D	W	T	V	T	Y	P	S	Y	Q	R	L	V	Q	Y	K	T	D	G	D	K	G	S	T	D	V	E	G	D	L	A	S	S	W	K	A	S	D	D	Q	K	E	W	T	F	T	L	K	D	N	A	K	F	A	D	G
Query Conservation
Alig confidence																						.	.	.	.																				.	.	.	.	.														.
Template Conservation																						.	.	.	.																				.	.	.	.	.														.
Template Sequence		G	K	D	L	N	I	S	L	P	L	K	T	K	S	I	A	P	Y	E	T	.	.	.	.	D	V	P	V	K	I	G	A	A	E	S	L	F	K	T	N	D	Q	G	.	.	.	.	.	K	I	E	K	A	L	V	K	S	Y	H	Q	P	.	N	D	T	T	L	D	I	E	L	K	D	N	I	K	F	Q	N	G
Template Known Secondary structure										S	S			S				T	T	T		.	.	.	.	S					T	T	S		B		S					T	T	S	.	.	.	.	.					S	S								.		T	T								S	S		B		T	T	S
Template Predicted Secondary structure																						.	.	.	.																				.	.	.	.	.														.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.					.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.						.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	V	T	A	E	A	V	K	L	S	F	E	R	L	L	K	I	G	Q	G	P	A	E	A	F	P	K	D	L	K	I	D	A	P	D	E	H	T	V	K	F	T	L	S	Q	P	F	A	P	F	L	Y	T	L	A	N	D	G	A	S	I	I	N	P	A	V	L	K	E	H	A	A	D	D	A	R	G	F	L
Query Conservation
Alig confidence																						.	.																																																	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.																																																	.	.	.	.	.	.	.	.	.
Template Sequence		Q	K	L	T	A	E	K	V	K	S	S	L	E	N	S	X	K	K	S	D	.	.	L	V	K	Y	S	L	P	I	S	S	I	T	A	K	G	Q	K	L	T	I	K	T	N	S	A	Y	P	E	L	V	S	E	L	A	N	P	F	X	A	I	Y	D	T	D	A	K	S	D	.	.	.	.	.	.	.	.	.	V
Template Known Secondary structure			B																			.	.															T	T							S	S			T	T					T	T	S	G	G	G		B			T	T		S	S		.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																						.	.																																																	.	.	.	.	.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.										.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	N	T	A	G	S	G	P	F	M	L	K	S	W	Q	K	G	Q	Q	L	V	L	V	P	N	P	H	Y	P	G	N	K	P	N	F	K	R	V	S	V	K	I	I	G	E	S	A	S	R	R	L	Q	L	S	R	G	D	I	D	I	A	D	A	L	P	V	D	Q	L	N	A	L	K	Q	E	N	K	V	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	Q	T	P	V	G	T	G	P	Y	Q	I	K	D	Y	K	Q	S	R	K	I	S	L	S	N	F	K	D	Y	W	Q	G	K	P	K	L	D	H	I	T	V	T	Y	Q	E	D	G	N	N	R	V	R	N	L	E	S	Q	K	D	D	L	I	T	D	V	P	V	N	K	V	Q	D	I	E	N	N	Q	N	L	K
Template Known Secondary structure		T	T	S				S	S	S								T	T	T								T	T		T	T	S			S		S																			T	T	S		S				S			G	G	G								T	T
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	E	Y	P	S	L	R	V	T	Y	L	Y	L	N	N	S	K	A	P	L	N	Q	A	D	L	R	R	A	I	S	W	S	T	D	Y	Q	G	M	V	N	G	I	L	S	G	N	G	K	Q	M	R	G	P	I	P	E	G	M	W	G	Y	D	A	T	A	M	Q	Y	N	H	D	E	T	K	A	K	A	E	W
Query Conservation
Alig confidence																				.																																														.
Template Conservation																				.																																														.
Template Sequence		V	S	K	E	S	G	F	R	T	S	L	L	X	Y	N	H	T	N	.	K	K	X	T	K	S	V	R	E	A	L	D	H	I	I	D	R	Q	G	I	A	D	H	I	Y	Q	G	Y	A	K	P	A	T	S	P	F	N	D	K	I	P	Y	I	K	E	.	P	K	L	T	K	Q	N	I	E	Q	A	K	X	L	L
Template Known Secondary structure																	T	T	S	.	T	T																						T	S	T	T	S					S	S	S	S		T	T	S	T	T				.
Template Predicted Secondary structure																				.																																														.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		349	350	.	.	.				.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure							.	.	.
Query SS confidence							.	.	.
Query Sequence		D	K	V	T	S	.	.	.	K	P	T	S	L	T	F	L	Y	S	D	N	D	P	N	W	E	P	I	A	L	A	T	Q	S	S	L	N	K	L	G	I	I	V	K	L	E	K	L	A	N	A	T	M	R	D	R	V	G	K	G	D	Y	D	I	A	I	G	N	W	S	P	D	F	A	D	P	Y	M	F	M	N
Query Conservation							.	.	.
Alig confidence							.	.	.
Template Conservation
Template Sequence		A	K	D	G	Y	T	K	E	H	P	L	K	I	K	L	I	T	Y	D	G	R	P	E	L	S	K	I	A	Q	V	L	Q	S	D	A	K	K	A	N	I	E	I	D	I	K	S	V	D	D	I	E	G	Y	L	K	D	R	S	A	W	D	A	T	X	Y	S	F	G	T	I	P	R	G	D	T	G	Y	F	F	N
Template Known Secondary structure			T	T	T			S	S	S										S	S	S	T															T	T	T									S						T	T		T	T	S		S								S		T	T	S		T
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	W	F	E	S	D	K	K	G	L	P	G	N	R	S	F	Y	E	N	S	E	V	D	K	L	L	R	N	A	L	A	T	T	D	Q	T	Q	R	T	R	D	Y	Q	Q	A	Q	K	I	V	I	D	D	A	A	Y	V	Y	L	F	Q	K	N	Y	Q	L	A	M	N	K	E	V	K	G	F	V	F	N	P	M	L
Query Conservation
Alig confidence									.	.	.
Template Conservation									.	.	.
Template Sequence		Q	A	Y	K	K	D	G	.	.	.	A	I	N	K	G	D	Y	N	N	S	N	V	D	D	L	I	N	Q	L	N	H	T	V	D	V	K	E	R	H	N	I	S	N	D	I	I	K	L	S	S	R	D	V	P	N	S	Y	I	A	Y	N	D	Q	I	V	A	A	N	S	K	V	K	N	Y	K	V	T	P	E	G
Template Known Secondary structure				T	S	T	T		.	.	.	T	T		T	T																T																							S															T	T								T	T	S
Template Predicted Secondary structure									.	.	.
Template SS confidence
		382	.	.	.	.	.	.				.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
		506	.	.	.	510	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	V	F	N	I	N	T	M	S	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Y	L	I	D	Y	R	T	T	I	E
Template Known Secondary structure							T	T
Template Predicted Secondary structure
Template SS confidence
		459	460	.	.	.	.	.	.	.	.	.